Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| Egg vs ppJ2 | Egg vs pJ2 | ppJ2 vs pJ2 | pJ2 vs J3 | J3 vs J4 | J4 vs F | J4 vs M | F vs M | G(J3 vs J2) | G(J2) vs pJ2 | G(J3) vs J3 | G(J2) lines | G(J3) lines | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
-0.37
|
1.57
|
1.95
|
0.31
|
-0.26
|
1.13
|
-1.16
|
2.31
|
|
|
|
|
|
|
|
|
1.99
|
0.99
|
-1.97
|
|
|
|
|
|
|
|
|
|
|
|
1.63
|
0.46
|
-1.16
|
0.83
|
0.52
|
-0.71
|
|
-0.94
|
|
|
|
|
|
|
|
1.82
|
1.06
|
-0.74
|
-0.92
|
-0.34
|
0.33
|
2.18
|
-1.82
|
2.72
|
-2.12
|
|
|
|
|
|
1.04
|
2.37
|
1.35
|
1.23
|
3.11
|
-2.88
|
|
-3.08
|
-13.53
|
8.26
|
-3.64
|
|
|
|
|
1.08
|
2.35
|
1.29
|
1.95
|
2.06
|
-1.97
|
-0.58
|
-1.36
|
-12.30
|
6.91
|
|
|
|
|
|
1.71
|
1.38
|
-0.31
|
1.46
|
2.21
|
3.69
|
-1.52
|
5.23
|
-7.01
|
6.89
|
|
|
|
|
|
0.98
|
0.33
|
-0.64
|
1.22
|
1.13
|
3.34
|
-0.83
|
4.20
|
|
|
|
|
|
|
|
-5.49
|
-6.22
|
-0.71
|
|
1.75
|
-0.65
|
|
-1.05
|
-7.72
|
6.54
|
|
|
|
|
|
0.75
|
|
-0.88
|
-0.82
|
|
-0.92
|
0.93
|
-1.82
|
|
|
|
|
|
|
|
-0.17
|
-1.10
|
-0.91
|
-0.50
|
0.75
|
-0.74
|
-0.65
|
|
|
|
|
|
|
|
|
-1.02
|
0.94
|
1.98
|
1.57
|
-0.80
|
-1.58
|
-2.10
|
0.55
|
-6.21
|
7.90
|
3.53
|
|
|
|
|
4.24
|
6.00
|
1.77
|
-2.06
|
-3.36
|
3.43
|
|
|
|
|
|
|
|
|
|
2.17
|
1.80
|
-0.35
|
-1.61
|
-1.09
|
2.04
|
1.57
|
0.50
|
|
|
|
|
|
|
|
-0.37
|
-0.62
|
-0.23
|
-0.85
|
|
0.82
|
|
0.93
|
|
5.21
|
|
|
|
|
|
0.33
|
0.30
|
|
1.31
|
-0.36
|
0.27
|
-0.63
|
0.93
|
|
|
|
|
|
|
|
-1.49
|
-2.15
|
-0.64
|
|
-0.41
|
1.04
|
0.93
|
|
|
|
|
|
|
|
|
-0.33
|
0.20
|
0.55
|
0.39
|
-0.73
|
0.67
|
|
0.52
|
|
3.63
|
|
|
|
|
|
-0.42
|
-0.19
|
0.24
|
0.26
|
-0.41
|
1.23
|
0.31
|
0.95
|
|
|
|
|
|
|
|
-0.90
|
-3.51
|
-2.60
|
-0.69
|
2.20
|
-3.84
|
1.87
|
-5.67
|
|
|
|
|
|
|
|
|
-0.69
|
-0.60
|
0.13
|
0.76
|
-0.22
|
0.34
|
-0.53
|
|
|
|
|
|
|
|
-1.06
|
-1.20
|
-0.12
|
|
-0.19
|
0.34
|
0.50
|
|
|
|
|
|
|
|
|
-0.26
|
|
0.21
|
0.24
|
0.57
|
0.27
|
-0.87
|
1.17
|
|
|
|
|
|
|
|
0.60
|
1.76
|
1.18
|
0.35
|
|
-0.19
|
-1.17
|
1.01
|
1.69
|
|
|
|
|
|
|
-0.49
|
1.63
|
2.13
|
-1.49
|
|
-0.64
|
|
|
-3.60
|
|
|
|
|
|
|
0.81
|
1.05
|
0.25
|
0.58
|
-0.30
|
0.33
|
|
0.75
|
-2.91
|
|
-2.48
|
|
|
|
|
-0.93
|
-1.10
|
|
-0.36
|
|
0.99
|
0.67
|
0.35
|
-4.83
|
|
|
|
|
|
|
|
|
|
|
|
-0.72
|
|
-0.58
|
-2.31
|
2.09
|
|
|
|
|
|
-0.69
|
0.10
|
0.80
|
0.40
|
|
|
|
0.23
|
|
2.21
|
|
|
|
|
|
-0.69
|
0.10
|
0.80
|
0.40
|
|
|
|
0.23
|
|
2.21
|
|
|
|
|
|
-1.28
|
|
1.44
|
|
|
|
-2.28
|
|
-6.02
|
|
-4.04
|
|
|
|
|
|
-0.34
|
-0.26
|
-0.55
|
|
-1.36
|
1.07
|
-2.41
|
|
|
|
|
|
|
|
|
-0.34
|
-0.26
|
-0.55
|
|
-1.36
|
1.07
|
-2.41
|
|
|
|
|
|
|
|
0.20
|
0.44
|
0.26
|
|
-0.18
|
|
-0.71
|
0.72
|
|
|
|
|
|
|
|
-1.90
|
-1.40
|
0.52
|
3.14
|
0.49
|
-3.02
|
-2.80
|
|
-4.92
|
|
|
|
|
|
|
1.46
|
|
-0.98
|
|
|
|
2.33
|
-1.91
|
|
|
-6.76
|
|
|
|
|
1.28
|
1.36
|
|
-1.04
|
|
-1.17
|
1.85
|
-2.99
|
|
|
|
|
|
|
|
2.32
|
1.95
|
-0.36
|
1.04
|
|
-2.18
|
|
|
|
2.16
|
|
|
|
|
|
|
0.51
|
0.49
|
0.42
|
0.22
|
0.43
|
-0.44
|
0.90
|
|
|
|
|
|
|
|
0.17
|
0.47
|
0.32
|
0.39
|
|
0.56
|
-0.29
|
0.88
|
|
|
|
|
|
|
|
-1.00
|
-0.63
|
0.38
|
0.36
|
-0.53
|
0.72
|
-0.74
|
1.49
|
|
|
|
|
|
|
|
-0.49
|
-0.45
|
|
0.10
|
0.28
|
|
|
|
|
|
|
|
|
|
|
-0.74
|
-0.83
|
|
0.24
|
-0.48
|
0.84
|
|
0.74
|
-1.80
|
|
|
|
|
|
|
|
-0.25
|
-0.21
|
-0.36
|
|
-0.31
|
0.39
|
-0.67
|
-2.34
|
2.95
|
|
|
|
|
|
-0.33
|
-0.62
|
-0.27
|
|
|
0.95
|
0.37
|
0.60
|
-4.60
|
|
|
|
|
|
|
-0.42
|
-0.51
|
|
0.13
|
0.34
|
|
|
|
|
|
|
|
|
|
|
1.24
|
|
-1.08
|
-1.00
|
|
-1.29
|
|
|
|
|
-8.37
|
5.77
|
|
|
|
-0.43
|
|
0.41
|
0.15
|
-0.50
|
0.37
|
|
0.41
|
|
|
|
|
|
|
|
|
|
|
-0.21
|
|
|
-0.33
|
0.42
|
|
|
|
|
|
|
|
0.28
|
1.34
|
1.08
|
-0.17
|
-0.54
|
0.91
|
-0.54
|
1.48
|
|
1.70
|
|
|
|