Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| Egg vs ppJ2 | Egg vs pJ2 | ppJ2 vs pJ2 | pJ2 vs J3 | J3 vs J4 | J4 vs F | J4 vs M | F vs M | G(J3 vs J2) | G(J2) vs pJ2 | G(J3) vs J3 | G(J2) lines | G(J3) lines | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
7.34
|
9.09
|
1.76
|
-2.83
|
-2.83
|
|
|
|
|
|
|
|
|
|
|
|
8.19
|
5.41
|
-2.25
|
-2.56
|
|
-4.65
|
|
|
|
|
|
|
|
|
|
6.59
|
4.31
|
-3.06
|
-4.45
|
|
|
|
|
|
-5.23
|
|
|
|
|
1.16
|
0.81
|
|
-0.87
|
0.74
|
3.57
|
-0.71
|
4.30
|
-5.82
|
|
-4.43
|
|
|
|
|
5.21
|
9.46
|
4.26
|
-1.35
|
-2.77
|
0.40
|
-1.28
|
1.70
|
|
|
-2.01
|
|
|
|
|
2.02
|
5.40
|
3.39
|
-0.37
|
-2.09
|
0.60
|
-1.15
|
1.77
|
|
|
|
|
|
|
|
-0.67
|
-0.48
|
0.21
|
|
1.26
|
-0.44
|
0.68
|
-1.09
|
-2.50
|
-1.65
|
-3.90
|
|
|
|
|
4.33
|
7.02
|
2.69
|
-2.49
|
|
|
|
|
|
|
-6.26
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
3.77
|
5.21
|
1.45
|
-1.80
|
-2.60
|
|
|
|
|
|
-5.30
|
|
|
|
|
4.66
|
6.64
|
2.00
|
-2.06
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
3.60
|
|
|
2.55
|
-3.00
|
-2.68
|
|
|
|
-7.03
|
|
|
|
|
6.95
|
8.57
|
1.64
|
-2.04
|
-4.13
|
|
|
|
|
-3.22
|
-6.17
|
|
|
|
|
|
|
|
5.06
|
|
|
|
|
|
|
|
|
|
|
|
3.32
|
9.95
|
6.65
|
-0.97
|
-4.02
|
1.24
|
|
0.69
|
-3.73
|
|
-3.67
|
|
|
|
|
7.75
|
6.29
|
-1.44
|
-3.07
|
-5.39
|
0.88
|
5.27
|
-4.34
|
4.97
|
-4.70
|
|
|
|
|
|
3.08
|
1.92
|
-1.15
|
|
-4.57
|
|
|
|
|
-4.96
|
-6.30
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
3.73
|
|
|
|
|
|
|
|
|
|
|
|
|
|
0.32
|
-0.52
|
-0.83
|
-1.98
|
|
0.60
|
1.49
|
-0.87
|
-2.97
|
|
-4.08
|
|
|
|
|
4.08
|
11.66
|
7.62
|
-0.91
|
-3.82
|
2.04
|
1.17
|
0.90
|
-3.56
|
|
-5.81
|
-10.60
|
|
|
|
4.08
|
11.66
|
7.62
|
-0.91
|
-3.82
|
2.04
|
1.17
|
0.90
|
-3.56
|
|
-5.81
|
-10.60
|
|
|
|
7.75
|
6.52
|
-1.21
|
-2.96
|
-5.01
|
|
4.44
|
-4.60
|
3.89
|
-2.30
|
|
|
|
|
|
7.66
|
6.11
|
-1.54
|
-2.66
|
-5.23
|
|
5.30
|
-5.20
|
6.43
|
-4.80
|
|
|
|
|
|
7.66
|
6.11
|
-1.54
|
-2.66
|
-5.23
|
|
5.30
|
-5.20
|
6.43
|
-4.80
|
|
|
|
|
|
3.27
|
3.39
|
|
-0.72
|
1.02
|
|
1.05
|
-1.06
|
|
|
-4.50
|
|
|
|
|
1.97
|
1.96
|
|
4.03
|
|
-2.67
|
-5.57
|
2.91
|
|
|
|
|
|
|
|
-1.33
|
-1.81
|
|
|
1.35
|
|
|
|
|
|
-3.57
|
|
|
|
|
|
7.87
|
2.61
|
-1.59
|
-5.71
|
|
|
|
|
|
-4.45
|
|
|
|
|
|
|
|
4.09
|
2.42
|
-3.41
|
2.98
|
-6.36
|
|
|
|
|
|
|
|
|
0.65
|
0.55
|
0.69
|
-0.35
|
|
|
|
|
|
|
|
|
|
|
|
|
|
4.09
|
2.42
|
-3.41
|
2.98
|
-6.36
|
|
|
|
|
|
|
|
|
-3.72
|
-3.32
|
|
|
|
|
1.32
|
-6.21
|
|
-5.88
|
|
|
|
|
9.74
|
13.00
|
3.28
|
-2.08
|
-2.99
|
-1.36
|
-1.95
|
|
|
|
|
|
|
|
|
3.61
|
|
-2.03
|
-4.45
|
|
|
|
|
|
-5.48
|
-8.36
|
|
|
|
|
4.18
|
|
-3.58
|
|
|
|
|
|
|
-6.04
|
-8.22
|
|
|
|
|
7.02
|
15.15
|
8.15
|
-1.56
|
-3.59
|
-3.48
|
-4.21
|
0.76
|
|
|
|
|
|
|
|
4.15
|
6.41
|
2.29
|
-1.45
|
|
|
|
|
|
|
|
|
|
|
|
7.81
|
9.90
|
2.11
|
-1.57
|
-3.54
|
-2.00
|
-2.11
|
|
|
-5.62
|
-4.04
|
|
|
|
|
9.43
|
5.44
|
-3.98
|
-1.94
|
|
|
|
|
3.99
|
-9.10
|
-6.63
|
|
|
|
|
1.43
|
-4.01
|
-5.43
|
|
6.94
|
-1.58
|
-0.75
|
-0.81
|
|
|
|
|
|
|
|
-0.98
|
-1.49
|
-0.49
|
-0.34
|
0.53
|
|
0.21
|
|
|
|
|
|
|
|
|
2.08
|
|
-3.03
|
|
7.94
|
-1.52
|
-4.52
|
3.02
|
|
|
-6.84
|
|
|
|
|
-1.79
|
-1.73
|
|
3.19
|
4.06
|
-5.47
|
2.11
|
-7.55
|
-6.08
|
|
|
|
|
|
|
-1.89
|
|
|
2.94
|
5.35
|
-6.91
|
2.65
|
-9.52
|
|
|
|
|
|
|
|
5.20
|
6.04
|
0.86
|
-1.78
|
-3.23
|
-1.20
|
|
-1.35
|
|
-3.03
|
-4.07
|
|
|
|
|
1.92
|
0.55
|
-1.36
|
-2.39
|
-0.50
|
-2.24
|
3.43
|
-5.64
|
-5.69
|
5.13
|
-2.70
|
|
|
|
|
1.92
|
0.55
|
-1.36
|
-2.39
|
-0.50
|
-2.24
|
3.43
|
-5.64
|
-5.69
|
5.13
|
-2.70
|
|
|
|
|
4.22
|
4.32
|
|
-1.95
|
-1.86
|
|
|
|
|
-2.90
|
-4.24
|
|
|