Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| Egg vs ppJ2 | Egg vs pJ2 | ppJ2 vs pJ2 | pJ2 vs J3 | J3 vs J4 | J4 vs F | J4 vs M | F vs M | G(J3 vs J2) | G(J2) vs pJ2 | G(J3) vs J3 | G(J2) lines | G(J3) lines | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
1.07
|
|
|
|
-1.34
|
|
|
|
|
|
8.18
|
|
|
|
|
1.07
|
|
|
|
-1.34
|
|
|
|
|
|
8.18
|
|
|
|
|
10.14
|
11.52
|
|
-3.69
|
0.64
|
-2.18
|
2.84
|
|
|
|
|
|
|
|
|
|
|
|
4.75
|
4.94
|
|
4.07
|
|
|
|
|
|
|
|
-3.64
|
-2.42
|
|
3.81
|
0.84
|
-5.28
|
-2.95
|
|
-6.97
|
|
|
|
-9.13
|
|
|
0.79
|
0.43
|
-0.34
|
|
0.35
|
0.72
|
|
0.66
|
|
|
|
|
|
|
|
2.59
|
-1.27
|
-3.84
|
-1.11
|
|
-1.87
|
5.09
|
-6.92
|
-3.65
|
|
-6.20
|
|
|
|
|
-1.80
|
-2.09
|
|
|
0.87
|
1.87
|
-1.35
|
3.24
|
-3.10
|
|
-5.30
|
|
|
|
|
6.06
|
3.96
|
-2.08
|
-3.52
|
|
-5.86
|
5.18
|
-11.00
|
10.98
|
-8.31
|
|
|
|
|
|
4.46
|
|
|
|
|
2.61
|
5.63
|
-2.97
|
-6.03
|
|
-7.69
|
|
|
|
|
2.04
|
-1.85
|
-3.88
|
|
1.50
|
-4.09
|
|
-3.15
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
-8.21
|
|
-7.26
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
-5.40
|
|
|
|
|
2.28
|
1.41
|
-0.86
|
|
|
|
|
|
-9.89
|
|
-9.21
|
|
|
|
|
|
|
|
|
4.73
|
|
-2.16
|
2.09
|
|
|
|
|
|
|
|
|
|
|
|
|
|
-1.27
|
1.45
|
-5.57
|
|
-4.90
|
|
|
|
|
|
|
0.87
|
|
|
1.41
|
|
1.38
|
-6.19
|
|
-4.08
|
|
|
|
|
1.20
|
1.90
|
0.72
|
|
0.79
|
1.26
|
-2.30
|
3.58
|
|
|
|
|
|
|
|
6.76
|
7.18
|
0.44
|
-2.01
|
-3.49
|
|
|
|
2.50
|
-3.27
|
-2.58
|
|
|
|
|
6.76
|
7.18
|
0.44
|
-2.01
|
-3.49
|
|
|
|
2.50
|
-3.27
|
-2.58
|
|
|
|
|
|
|
-0.69
|
|
|
|
|
|
-4.00
|
-4.85
|
-8.70
|
|
|
|
|
|
|
|
|
2.13
|
|
|
|
|
|
-6.94
|
|
|
|
|
1.63
|
0.96
|
|
|
|
|
1.64
|
-2.86
|
-5.31
|
|
-8.85
|
|
|
|
|
1.35
|
0.95
|
-0.38
|
-0.41
|
0.48
|
|
1.23
|
-1.31
|
-2.05
|
|
|
|
|
|
|
1.35
|
0.95
|
-0.38
|
-0.41
|
0.48
|
|
1.23
|
-1.31
|
-2.05
|
|
|
|
|
|
|
|
-2.93
|
|
3.94
|
3.54
|
3.59
|
|
4.19
|
|
|
|
|
|
|
|
1.05
|
0.49
|
-0.55
|
-0.56
|
|
0.68
|
1.39
|
-0.67
|
|
|
|
|
|
|
|
|
|
|
|
|
1.55
|
3.74
|
-2.16
|
|
|
|
|
|
|
|
|
|
|
|
|
1.55
|
3.74
|
-2.16
|
|
|
|
|
|
|
|
|
|
|
|
|
1.28
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
-4.15
|
|
|
|
|
-9.95
|
|
-12.29
|
|
|
|
|
|
2.04
|
|
|
|
1.34
|
|
1.94
|
|
|
|
|
|
|
|
0.75
|
|
-0.86
|
|
0.69
|
-1.81
|
|
-1.11
|
-5.16
|
|
-8.17
|
|
|
|
|
|
-1.21
|
|
|
1.64
|
|
|
|
-4.43
|
|
-6.40
|
|
5.28
|
|
|
3.83
|
3.40
|
|
|
|
|
|
|
|
|
|
|
|
|
|
2.73
|
2.77
|
|
-1.49
|
|
0.65
|
0.93
|
|
|
|
|
|
|
|
|
|
-2.52
|
|
2.95
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
-4.46
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
-7.96
|
|
-8.78
|
|
|
|
|
-0.86
|
-1.11
|
-0.23
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
3.29
|
|
|
|
|
-3.74
|
|
|
|
|
|
|
|
|
|
3.29
|
|
|
|
|
-3.74
|
|
|
|
|
|
|
|
-4.83
|
-6.16
|
-1.32
|
-2.35
|
|
1.02
|
-2.73
|
3.79
|
|
6.73
|
|
|
|
|
|
-5.31
|
|
5.04
|
|
|
|
|
|
|
|
|
|
|