Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| Egg vs ppJ2 | Egg vs pJ2 | ppJ2 vs pJ2 | pJ2 vs J3 | J3 vs J4 | J4 vs F | J4 vs M | F vs M | G(J3 vs J2) | G(J2) vs pJ2 | G(J3) vs J3 | G(J2) lines | G(J3) lines | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
2.21
|
2.69
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1.47
|
5.90
|
4.44
|
-1.57
|
-2.46
|
|
|
0.56
|
|
|
-3.40
|
|
|
|
|
5.41
|
9.98
|
4.62
|
-3.86
|
|
|
|
|
|
|
-7.27
|
|
|
|
|
5.85
|
7.74
|
1.91
|
-2.87
|
-5.21
|
|
|
|
|
-3.82
|
-7.02
|
|
|
|
|
4.78
|
5.13
|
0.36
|
-2.92
|
-3.10
|
|
|
-1.48
|
4.31
|
-3.43
|
|
|
|
|
|
5.12
|
4.90
|
-0.20
|
-2.68
|
-3.82
|
|
|
|
4.61
|
-4.81
|
|
|
|
|
|
7.24
|
5.26
|
-1.97
|
-4.65
|
3.06
|
-3.45
|
4.18
|
-7.60
|
|
|
|
|
|
|
|
|
|
|
3.04
|
1.64
|
-3.47
|
|
-3.26
|
|
|
|
|
|
|
|
2.48
|
4.59
|
2.12
|
-2.30
|
-2.65
|
|
|
|
|
|
|
|
|
|
|
7.52
|
6.96
|
|
|
|
|
|
|
-8.79
|
|
-6.88
|
|
|
|
|
6.60
|
6.95
|
0.36
|
-2.86
|
-4.13
|
|
|
|
|
|
-4.39
|
|
|
|
|
8.65
|
8.48
|
|
-1.48
|
-3.31
|
|
|
|
|
-3.62
|
-5.63
|
|
|
|
|
2.13
|
0.88
|
-1.23
|
0.29
|
1.10
|
-0.41
|
|
-0.73
|
-7.52
|
|
-3.58
|
|
|
|
|
0.94
|
-0.19
|
-1.11
|
-2.41
|
|
-1.22
|
3.32
|
-4.51
|
-9.06
|
8.84
|
|
|
|
|
|
0.94
|
-0.19
|
-1.11
|
-2.41
|
|
-1.22
|
3.32
|
-4.51
|
-9.06
|
8.84
|
|
|
|
|
|
2.93
|
3.09
|
|
-2.00
|
6.60
|
-1.87
|
-2.55
|
|
|
|
-5.40
|
|
|
|
|
2.42
|
2.03
|
|
1.10
|
-1.91
|
|
-3.45
|
3.69
|
|
|
|
|
|
|
|
|
7.01
|
4.48
|
-2.91
|
|
|
|
|
|
|
|
|
|
|
|
5.60
|
8.28
|
2.70
|
-1.88
|
-3.03
|
-1.13
|
-1.49
|
|
|
|
|
|
|
|
|
-0.89
|
-1.37
|
|
|
|
|
|
-0.91
|
|
|
|
|
|
|
|
|
-1.44
|
|
|
4.09
|
-1.91
|
-1.56
|
|
-7.61
|
|
-7.34
|
|
|
|
|
|
7.50
|
3.85
|
-1.73
|
|
|
|
|
|
|
|
|
|
|
|
1.10
|
|
-0.82
|
|
|
|
0.92
|
-0.78
|
|
|
|
|
|
|
|
|
2.25
|
2.14
|
-1.82
|
|
|
1.04
|
|
|
|
|
|
|
|
|
|
12.26
|
9.13
|
-1.33
|
-3.31
|
|
|
|
-4.37
|
|
-4.03
|
|
|
|
|
3.66
|
6.93
|
3.28
|
-0.41
|
-3.13
|
1.65
|
|
2.64
|
|
|
|
|
|
|
|
1.45
|
9.44
|
8.01
|
-0.78
|
-3.64
|
|
-2.80
|
3.12
|
|
|
|
|
|
|
|
|
-1.77
|
-1.66
|
-1.93
|
|
1.05
|
2.11
|
-1.03
|
-2.88
|
|
-5.70
|
|
|
|
|
|
|
-1.99
|
|
|
|
|
|
|
|
|
|
|
|
|
|
2.78
|
2.15
|
-2.55
|
|
|
|
|
|
|
-5.70
|
|
|
|
|
3.29
|
2.42
|
-0.85
|
-2.93
|
-0.63
|
-2.33
|
4.08
|
-6.38
|
|
|
|
|
|
|
|
|
|
|
|
|
-1.83
|
-1.24
|
|
|
|
|
|
|
|
|
1.64
|
6.52
|
4.90
|
-1.65
|
-3.37
|
|
-1.88
|
2.46
|
|
|
|
|
|
|
|
3.99
|
8.62
|
4.64
|
-1.16
|
-3.23
|
|
|
|
|
|
|
|
|
|
|
2.96
|
10.96
|
8.05
|
|
-3.00
|
1.15
|
-0.99
|
2.16
|
-8.62
|
|
|
|
|
|
|
2.19
|
9.11
|
6.95
|
|
-3.08
|
1.21
|
-0.74
|
1.97
|
-4.49
|
|
|
|
|
|
|
5.44
|
5.86
|
0.44
|
-1.86
|
-1.75
|
|
|
|
|
-5.13
|
-5.82
|
|
|
|
|
2.30
|
9.90
|
7.61
|
-0.33
|
-3.56
|
|
-0.96
|
0.86
|
|
|
|
|
|
|
|
2.18
|
10.72
|
8.55
|
-1.54
|
-3.08
|
|
-1.51
|
1.71
|
|
|
|
|
|
|
|
4.50
|
3.16
|
-1.32
|
-1.67
|
|
1.00
|
3.56
|
-2.53
|
|
|
|
|
|
|
|
4.69
|
4.72
|
|
5.53
|
-3.14
|
1.26
|
|
1.79
|
-10.50
|
|
-3.46
|
|
|
|
|
4.80
|
2.48
|
-2.30
|
-1.33
|
2.00
|
|
|
|
-8.32
|
4.46
|
-4.98
|
|
|
|
|
2.62
|
|
-2.01
|
0.67
|
2.77
|
-3.10
|
-1.83
|
-1.24
|
-5.44
|
|
|
|
|
|
|
2.62
|
|
-2.01
|
0.67
|
2.77
|
-3.10
|
-1.83
|
-1.24
|
-5.44
|
|
|
|
|
|
|
4.26
|
4.44
|
|
-2.84
|
|
|
|
|
5.08
|
-2.98
|
|
|
|
|
|
-2.04
|
-2.89
|
|
|
3.15
|
-1.90
|
|
|
|
|
|
|
|
|
|
3.48
|
6.75
|
3.29
|
-3.00
|
-1.44
|
|
|
|
|
|
|
|
|
|
|
4.58
|
2.24
|
-2.31
|
0.41
|
1.07
|
-1.85
|
1.23
|
-3.06
|
|
|
|
|
|
|
|
4.58
|
2.24
|
-2.31
|
0.41
|
1.07
|
-1.85
|
1.23
|
-3.06
|
|
|
|
|
|
|
|
4.58
|
2.24
|
-2.31
|
0.41
|
1.07
|
-1.85
|
1.23
|
-3.06
|
|
|
|
|
|