Filters

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Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
–
–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Egg vs ppJ2 Egg vs pJ2 ppJ2 vs pJ2 pJ2 vs J3 J3 vs J4 J4 vs F J4 vs M F vs M G(J3 vs J2) G(J2) vs pJ2 G(J3) vs J3 G(J2) lines G(J3) lines
0.11
0.32
0.34
-0.26
-0.61
-0.46
0.17
0.40
-0.27
0.69
-1.21
-1.35
-0.12
0.24
0.80
0.58
0.86
2.13
1.28
-0.30
-0.66
-1.51
0.88
-0.60
-0.66
0.19
0.66
-1.06
1.09
-0.19
-0.39
-0.19
0.18
0.68
0.84
5.07
0.56
1.16
0.62
0.32
-0.52
-0.31
-0.79
0.51
-0.70
-0.96
-0.24
0.49
-0.34
1.60
1.83
-1.27
-1.03
0.26
-0.20
0.52
0.89
0.62
0.31
-0.30
-0.24
-0.29
0.71
0.28
0.46
-1.21
2.02
1.49
5.07
-0.47
-0.47
0.42
-0.89
-1.76
-0.85
2.12
1.83
-1.73
1.53
-3.22
-0.21
0.14
-0.20
0.38
0.60
1.45
0.49
-0.95
-2.37
-0.91
0.46
3.41
-2.93
-0.14
-0.26
-0.24
0.36
-0.39
0.78
4.49
5.29
0.45
0.52
0.41
-0.81
-1.47
-0.65
0.56
0.41
-0.76
0.31
-1.04
4.13
-0.28
0.28
0.20
-0.25
0.39
-0.35
0.77
-0.27
0.59
0.88
-0.12
-0.28
0.49
-0.75
1.26
4.30
-1.31
-1.59
-0.27
1.58
1.27
-0.76
-1.57
0.83
-1.65
-4.68
-3.02
1.60
-0.45
0.58
-0.99
-4.78
1.79
1.00
-0.77
-1.36
-1.20
1.37
2.19
-0.78
1.48
1.55
-0.61
-1.28
-1.25
-1.51
-2.15
-0.62
-0.71
1.50
-2.05
1.27
-3.29
-1.07
-2.14
-1.05
-0.25
0.41
-0.20
0.69
-0.87
-3.06
-1.07
-2.14
-1.05
-0.25
0.41
-0.20
0.69
-0.87
-3.06
-2.87
-3.50
3.43
-0.68
-11.27
-7.41
-1.88
-2.25
3.03
-1.90
-1.51
-4.78
-4.46
-1.06
-1.23
-0.16
0.16
0.41
0.53
0.96
-0.37
-1.31
-0.94
-0.79
2.65
-3.42
0.96
-0.37
-1.31
-0.94
-0.79
2.65
-3.42
0.96
-0.37
-1.31
-0.94
-0.79
2.65
-3.42
-0.27
-0.28
-0.42
-0.69
-0.79
-0.97
-1.07
-0.13
-0.33
0.54
0.43
-0.24
-0.14
0.11
0.20
-0.28
0.61
-0.66
1.29
0.47
-0.33
-1.01
-1.60
-0.66
2.69
-3.32
-0.29
-0.33
-0.20
1.43
1.34
-0.21
-0.15
0.32
0.35
0.76
0.76
-3.15
-3.09
-0.62
0.86
0.94
1.95
-0.98
2.50
-2.98
2.70
1.59
-1.09
-2.25
3.25
-3.24
-4.29
-0.24
0.15
0.40
-0.16
0.30
-0.44
0.76
5.34
4.24
-1.09
-2.52
-1.69
-2.31
4.11
-6.38
0.78
0.81
1.01
-1.01
-0.97
-5.25
5.04
0.77
2.10
1.35
-1.25
-1.65
1.66
1.98
-6.59
-3.92
-0.99
2.20
3.20
0.61
-1.09
1.00
-1.30
2.32
-9.55
9.24
-0.42
0.42
0.34
0.17
1.47
0.80
-0.65
-0.66
-0.75
-0.76
-0.48
0.29
-0.23
0.32
-0.68
1.03