Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| SCN putative | SCN known (N) | SCN known (P) | BCN known | BCN putative | Effector Islands | Cluster Name | (score) | |
|---|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
19-Eggs_Female
|
1.00
|
|
|
|
|
|
|
|
|
4-Egg_Male
|
0.97
|
|
|
|
|
|
|
|
|
9-Not_Clustered
|
0.75
|
|
|
|
|
|
|
|
|
7-ppJ2
|
1.00
|
|
|
|
|
|
|
|
|
8-Not_Clustered
|
0.45
|
|
|
|
|
|
|
|
|
23-Female
|
1.00
|
|
|
|
|
|
|
|
|
28-Egg
|
1.00
|
|
|
|
|
|
|
|
|
14-Not_Clustered
|
0.22
|
|
|
|
|
|
|
|
|
29-Not_Clustered
|
0.88
|
|
|
|
|
|
|
|
|
24-J3_Female
|
1.00
|
|
|
|
|
|
|
|
|
24-J3_Female
|
1.00
|
|
|
|
|
|
|
|
|
24-J3_Female
|
1.00
|
|
|
|
|
|
|
|
|
14-Not_Clustered
|
0.61
|
|
|
|
|
|
|
|
|
13-Not_Clustered
|
0.96
|
|
|
|
|
|
|
|
|
24-J3_Female
|
1.00
|
|
|
|
|
|
|
|
|
24-Not_Clustered
|
0.81
|
|
|
|
|
|
|
Hsc_gene_12779
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
Hsc_gene_12779
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
24-Not_Clustered
|
0.31
|
|
|
|
|
|
|
|
|
4-Egg_Male
|
1.00
|
|
|
|
|
|
|
|
|
24-J3_Female
|
1.00
|
|
|
|
|
|
|
|
|
29-J3_J4_Female_Male
|
0.98
|
|
|
|
|
|
|
|
|
24-J3_Female
|
0.99
|
|
|
|
|
|
|
|
|
3-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
24-J3_Female
|
1.00
|
|
|
|
|
|
|
|
|
2-Not_Clustered
|
0.87
|
|
|
|
|
|
|
|
|
19-Eggs_Female
|
1.00
|
|
|
|
|
|
|
|
|
26-J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
19-Eggs_Female
|
0.97
|
|
|
|
|
|
|
|
|
1-J4_Female
|
1.00
|
|
|
|
|
|
|
|
|
14-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
28-Not_Clustered
|
0.89
|
|
|
|
|
|
|
|
|
14-Not_Clustered
|
0.61
|
|
|
|
|
|
|
|
|
7-ppJ2
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
10-Not_Clustered
|
0.85
|
|
|
|
|
|
|
|
|
14-Not_Clustered
|
0.82
|
|
|
|
|
|
|
|
|
1-J4_Female
|
1.00
|
|
|
|
|
|
|
|
|
27-ppJ2_pJ2_J3_J4_Female_Male
|
0.97
|
|
|
|
|
|
|
|
|
29-Not_Clustered
|
0.83
|
|
|
|
|
|
|
|
|
18-Not_Clustered
|
0.72
|
|
|
|
|
|
|
|
|
7-Not_Clustered
|
0.73
|
|
|
|
|
|
|
|
|
14-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
14-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
14-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
10-Pre_planta
|
0.99
|
|
|
|
|
|
|
|
|
7-Not_Clustered
|
0.91
|
|
|
|
|
|
|
|
|
9-Not_Clustered
|
0.92
|
|
|
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
2-pJ2_J3_J4_Female
|
0.99
|