Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| SCN putative | SCN known (N) | SCN known (P) | BCN known | BCN putative | Effector Islands | Cluster Name | (score) | |
|---|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
11-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
29-Not_Clustered
|
0.85
|
|
|
Yes
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
17-ppJ2_pJ2
|
0.99
|
|
|
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
28-Egg
|
1.00
|
|
|
|
|
|
|
|
|
10-Not_Clustered
|
0.94
|
|
|
|
|
|
|
|
|
28-Not_Clustered
|
0.56
|
|
|
Yes
|
|
|
|
Hsc_gene_26123
|
|
20-Egg_ppJ2_pJ2_J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
|
|
|
|
|
|
11-Not_described
|
0.99
|
|
|
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
22-J4_Male
|
0.98
|
|
|
|
|
|
|
|
|
22-J4_Male
|
0.98
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Hsc_gene_26104
|
|
8-Eggs_J4_Males
|
1.00
|
|
|
|
|
|
|
|
|
8-Not_Clustered
|
0.53
|
|
|
|
|
|
|
|
|
26-J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
26-J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
2-Not_Clustered
|
0.72
|
|
|
|
|
|
|
|
|
24-J3_Female
|
0.98
|
|
|
|
|
|
|
|
|
8-Not_Clustered
|
0.80
|
|
|
|
|
|
|
|
|
8-Not_Clustered
|
0.80
|
|
|
|
|
|
|
|
|
7-Not_Clustered
|
0.75
|
|
|
Yes
|
|
|
|
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
3-Not_Clustered
|
0.54
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
20-Egg_ppJ2_pJ2_J3_J4
|
0.98
|
|
|
|
|
|
|
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
Yes
|
|
|
|
|
Hg_chrom1_TN10mRNA_241
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
Hg_chrom1_TN10mRNA_242
|
13-Not_described
|
1.00
|
|
|
|
|
|
|
|
Hg_chrom1_TN10mRNA_243
|
17-ppJ2_pJ2
|
1.00
|
|
|
Yes
|
|
|
|
|
Hg_chrom1_TN10mRNA_244
|
21-pJ2_J3
|
1.00
|
|
|
Yes
|
25A01|AF500019.1
|
25A01|AF5000191
|
|
|
Hg_chrom1_TN10mRNA_245
|
21-pJ2_J3
|
1.00
|
|
|
Yes
|
|
|
|
|
Hg_chrom1_TN10mRNA_246
|
17-ppJ2_pJ2
|
1.00
|
|
|
Yes
|
|
|
|
|
Hg_chrom1_TN10mRNA_247
|
17-ppJ2_pJ2
|
1.00
|
|
|
Yes
|
|
|
|
|
Hg_chrom1_TN10mRNA_248
|
30-pJ2
|
1.00
|
|
|
|
|
|
|
|
|
30-pJ2
|
1.00
|
|
|
|
|
|
|
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
|
|
|
|
|
|
|
|