Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
SCN putative SCN known (N) SCN known (P) BCN known BCN putative Effector Islands Cluster Name (score)
26-J3_J4
1.00
10-Pre_planta
1.00
10-Not_Clustered
0.94
4-Egg_Male
1.00
27-ppJ2_pJ2_J3_J4_Female_Male
1.00
1-Not_Clustered
0.95
1-J4_Female
0.99
28-Egg
1.00
22-J4_Male
1.00
22-J4_Male
1.00
19-Eggs_Female
1.00
20-Not_Clustered
0.48
Hgg-30|AF345796.1
24-J3_Female
1.00
17-Not_Clustered
0.86
25-Not_Clustered
0.93
5-pJ2_J3_J4
1.00
13-Not_described
1.00
28-Not_Clustered
0.40
7-ppJ2
1.00
12-Not_Clustered
0.65
Hsc_gene_21197
22-Not_Clustered
0.91
7-Not_Clustered
0.93
28-Egg
0.99
9-Migratory
0.99
13-Not_described
1.00
12-Not_Clustered
0.52
9-Migratory
1.00
7-Not_Clustered
0.55
20-Not_Clustered
0.89
Yes
Hsc_gene_21205
30-Not_Clustered
0.96
1-J4_Female
1.00
20-Not_Clustered
0.96
26-Not_Clustered
0.85
4-Egg_Male
1.00
14-Not_described
1.00
7-ppJ2
1.00
8-Eggs_J4_Males
1.00
28-Egg
1.00
10-Pre_planta
1.00
26-J3_J4
1.00
5-Not_Clustered
0.94
17-Not_Clustered
0.78
2-pJ2_J3_J4_Female
1.00
29-J3_J4_Female_Male
0.97
9-Not_Clustered
0.80
9-Migratory
1.00