Filters

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Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
SCN putative SCN known (N) SCN known (P) BCN known BCN putative Effector Islands Cluster Name (score)
5-Not_Clustered
0.82
5-Not_Clustered
0.82
Hsc_gene_15002;Hsc_gene_15003;Hsc_gene_15018;Hsc_gene_15974;Hsc_gene_16080;Hsc_gene_21100;Hsc_gene_14996;Hsc_gene_14977;Hsc_gene_15008;Hsc_gene_24982;Hsc_gene_23186;Hsc_gene_8449;Hsc_gene_8453
21-Not_Clustered
0.70
23-Female
1.00
27-Not_Clustered
0.53
13-Not_Clustered
0.60
19-Eggs_Female
1.00
Yes
Hsc_gene_3591
9-Migratory
1.00
Hsc_gene_1943;Hsc_gene_11688;Hsc_gene_1514;Hsc_gene_1515;Hsc_gene_17202;Hsc_gene_19142;Hsc_gene_17216;Hsc_gene_19127;Hsc_gene_24308
Hsc_gene_1516
15-Male
1.00
Yes
13-Not_Clustered
0.40
17-ppJ2_pJ2
1.00
1-J4_Female
1.00
14-Not_Clustered
0.83
23-Female
1.00
24-J3_Female
1.00
Yes
17-ppJ2_pJ2
0.99
Yes
17-ppJ2_pJ2
0.99
7-Not_Clustered
0.93
9-Migratory
1.00
9-Not_Clustered
0.70
9-Not_Clustered
0.70
23-Female
1.00
3-Not_Clustered
0.55
15-Male
1.00
15-Male
1.00
3-Not_Clustered
0.68
20-Not_Clustered
0.88
9-Not_Clustered
0.57
28-Egg
1.00
28-Egg
1.00