Filters

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Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
SCN putative SCN known (N) SCN known (P) BCN known BCN putative Effector Islands Cluster Name (score)
Hg_chrom1_TN10mRNA_702
12-Not_Clustered
0.39
Hg_chrom1_TN10mRNA_703
6-Not_Clustered
0.79
Yes
Hg_chrom1_TN10mRNA_704
8-Not_Clustered
0.71
9-Migratory
1.00
20-Egg_ppJ2_pJ2_J3_J4
0.98
Yes
Hsc_gene_17086
16-Females_and_Males
1.00
17-Not_Clustered
0.77
14-Not_Clustered
0.68
22-J4_Male
1.00
10-Pre_planta
1.00
13-Not_described
1.00
9-Not_Clustered
0.95
18-Not_Clustered
0.63
13-Not_Clustered
0.95
23-Female
1.00
15-Male
1.00
23-Female
1.00
17-ppJ2_pJ2
1.00
17-ppJ2_pJ2
1.00
1-J4_Female
1.00
Yes
30-pJ2
0.99
7-ppJ2
1.00
15-Male
1.00
24-J3_Female
0.97
27-Not_Clustered
0.78
18-Not_Clustered
0.92
6-Not_Clustered
0.82
Yes
17-ppJ2_pJ2
1.00
Yes
17-ppJ2_pJ2
1.00
4-Not_Clustered
0.75
Yes
21-Not_Clustered
0.59
13-Not_described
1.00
Hsc_gene_2750
9-Migratory
0.96
Yes
30-pJ2
0.99
2-pJ2_J3_J4_Female
0.98
25-Eggs_Female
0.98
14-Not_Clustered
0.87
7-Not_Clustered
0.60
9-Migratory
0.99
17-ppJ2_pJ2
1.00