Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| SCN putative | SCN known (N) | SCN known (P) | BCN known | BCN putative | Effector Islands | Cluster Name | (score) | |
|---|---|---|---|---|---|---|---|---|
|
|
17G06|AF490247.1
|
|
|
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
|
17G06|AF490247.1
|
17G06|AF4902471
|
|
|
|
|
|
|
|
|
|
|
|
|
|
26-J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
|
|
|
|
|
|
9-Not_Clustered
|
0.54
|
|
|
Yes
|
|
|
|
Hsc_gene_2729;Hsc_gene_2733
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
|
|
|
|
|
|
2-pJ2_J3_J4_Female
|
1.00
|
|
|
|
|
|
|
|
|
3-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
Yes
|
|
|
|
Hsc_gene_2729;Hsc_gene_2733
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
|
|
|
|
|
|
5-pJ2_J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
22-Not_Clustered
|
0.65
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1-J4_Female
|
1.00
|
|
|
|
|
|
|
|
|
30-Not_Clustered
|
0.54
|
|
|
|
|
|
|
|
|
10-Not_Clustered
|
0.78
|
|
|
|
|
|
|
|
|
28-Not_Clustered
|
0.61
|
|
|
|
|
|
|
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
|
|
|
|
|
|
30-Not_Clustered
|
0.65
|
|
|
|
|
|
|
|
|
6-Not_Clustered
|
0.67
|
|
|
|
|
|
|
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
9-Not_Clustered
|
0.78
|
|
|
Yes
|
|
|
|
|
|
28-Not_Clustered
|
0.55
|
|
|
Yes
|
|
|
|
|
|
30-pJ2
|
0.98
|
|
|
|
|
|
|
|
|
13-Not_described
|
1.00
|
|
|
|
|
|
|
Hsc_gene_14976
|
|
26-J3_J4
|
1.00
|
|
|
Yes
|
|
|
Hsc_gene_14990;Hsc_gene_25688;Hsc_gene_24982
|
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
24-J3_Female
|
0.98
|
|
|
|
|
|
|
|
|
5-pJ2_J3_J4
|
1.00
|
|
|
Yes
|
|
|
|
|
|
30-pJ2
|
1.00
|
|
|
|
|
|
|
|
|
22-Not_Clustered
|
0.82
|
|
|
|
|
|
|
|
|
22-J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
17-ppJ2_pJ2
|
1.00
|
|
|
|
|
|
|
|
|
17-Not_Clustered
|
0.94
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
|
|
|
|
|
|
9-Migratory
|
0.99
|
|
|
|
|
|
|
|
|
1-J4_Female
|
1.00
|
|
|
Yes
|
|
|
|
|
Hg_chrom1_TN10mRNA_789
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Hg_chrom1_TN10mRNA_790
|
|
|
|
|
|
|
|
|
|
Hg_chrom1_TN10mRNA_791
|
9-Migratory
|
1.00
|
|
|
Yes
|
|
|
Hsc_gene_24982
|
|
Hg_chrom1_TN10mRNA_792
|
21-pJ2_J3
|
1.00
|
|
|
Yes
|
|
|
|
Hsc_gene_14988;Hsc_gene_14999;Hsc_gene_15005;Hsc_gene_14986
|
Hg_chrom1_TN10mRNA_793
|
13-Not_described
|
0.99
|