Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| SCN putative | SCN known (N) | SCN known (P) | BCN known | BCN putative | Effector Islands | Cluster Name | (score) | |
|---|---|---|---|---|---|---|---|---|
|
|
|
|
Hsc_gene_21100;Hsc_gene_25688;Hsc_gene_22900;Hsc_gene_22902;Hsc_gene_24982
|
|
Hg_chrom1_TN10mRNA_794
|
21-pJ2_J3
|
1.00
|
|
|
Yes
|
|
|
|
|
Hg_chrom1_TN10mRNA_795
|
21-pJ2_J3
|
1.00
|
|
|
Yes
|
32E03|AF500036.1
|
|
Hsc_gene_24982
|
|
Hg_chrom1_TN10mRNA_796
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
Hg_chrom1_TN10mRNA_797
|
22-Not_Clustered
|
0.51
|
|
|
|
|
|
|
|
Hg_chrom1_TN10mRNA_798
|
30-pJ2
|
1.00
|
|
|
Yes
|
|
|
Hsc_gene_24982
|
|
Hg_chrom1_TN10mRNA_799
|
21-pJ2_J3
|
0.98
|
|
|
|
|
|
|
|
|
10-Not_Clustered
|
0.82
|
|
|
|
|
|
|
|
|
11-Not_described
|
1.00
|
|
|
|
|
|
|
|
Hg_chrom1_TN10mRNA_800
|
23-Female
|
1.00
|
|
|
Yes
|
32E03|MT012335.1
|
|
Hsc_gene_24982
|
|
Hg_chrom1_TN10mRNA_801
|
21-pJ2_J3
|
1.00
|
|
|
Yes
|
|
|
|
Hsc_gene_14988;Hsc_gene_14999;Hsc_gene_15005;Hsc_gene_14986
|
Hg_chrom1_TN10mRNA_802
|
8-Not_Clustered
|
0.92
|
|
|
Yes
|
|
Gland4|MT0123161
|
Hsc_gene_14990;Hsc_gene_15974;Hsc_gene_21100;Hsc_gene_25688;Hsc_gene_25898;Hsc_gene_3587;Hsc_gene_22900;Hsc_gene_22902;Hsc_gene_24982
|
|
Hg_chrom1_TN10mRNA_803
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
15-Not_Clustered
|
0.80
|
|
|
|
|
|
|
|
|
27-Not_Clustered
|
0.61
|
|
|
|
|
|
|
|
|
9-Migratory
|
1.00
|
|
|
|
|
|
|
|
|
29-J3_J4_Female_Male
|
1.00
|
|
|
|
|
|
|
|
|
30-Not_Clustered
|
0.80
|
|
|
|
|
|
|
|
|
23-Female
|
0.99
|
|
|
|
|
|
|
|
|
4-Not_Clustered
|
0.69
|
|
|
|
|
|
|
|
|
23-Female
|
1.00
|
|
|
|
|
|
Hsc_gene_14990;Hsc_gene_15008
|
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
Hsc_gene_15022
|
|
|
|
|
|
|
|
|
|
|
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Hsc_gene_15030
|
|
|
|
|
|
|
|
|
|
Hsc_gene_15030
|
|
10-Pre_planta
|
0.98
|
|
|
|
|
|
|
|
|
30-pJ2
|
0.99
|
|
|
|
|
|
|
|
|
10-Not_Clustered
|
0.46
|
|
|
Yes
|
|
|
Hsc_gene_15022
|
|
|
|
|
|
|
|
|
|
|
|
|
2-Not_Clustered
|
0.84
|
|
|
|
|
|
|
Hsc_gene_15024
|
|
2-pJ2_J3_J4_Female
|
1.00
|
|
|
|
|
|
|
|
|
3-Not_Clustered
|
0.93
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
7-Not_Clustered
|
0.94
|
|
|
|
|
|
|
|
|
30-Not_Clustered
|
0.73
|
|
|
|
|
|
|
|
|
11-Not_Clustered
|
0.76
|
|
|
|
|
|
|
Hsc_gene_15030
|
|
30-pJ2
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
19-Eggs_Female
|
0.99
|
|
|
|
|
|
|
|
|
21-pJ2_J3
|
1.00
|
|
|
|
|
|
|
|
|
2-Not_Clustered
|
0.74
|
|
|
|
|
|
|
|
|
24-Not_Clustered
|
0.86
|
|
|
|
|
|
|
|
|
24-J3_Female
|
1.00
|
|
|
|
|
|
|
|
|
9-Migratory
|
1.00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
28-Not_Clustered
|
0.92
|
|
|
|
|
|
|
|
|
20-Egg_ppJ2_pJ2_J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
10-Not_Clustered
|
0.94
|