Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| SCN putative | SCN known (N) | SCN known (P) | BCN known | BCN putative | Effector Islands | Cluster Name | (score) | |
|---|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
18-ppJ2_pJ2_J3_J4_Male
|
1.00
|
|
|
|
|
|
|
|
|
26-J3_J4
|
0.99
|
|
|
Yes
|
|
|
|
|
|
20-Not_Clustered
|
0.95
|
|
|
|
|
|
|
|
|
20-Not_Clustered
|
0.78
|
|
|
|
|
|
|
Hsc_gene_2629
|
|
4-Egg_Male
|
1.00
|
|
|
|
|
|
|
|
|
19-Eggs_Female
|
0.99
|
|
|
|
|
|
|
|
|
4-Egg_Male
|
0.98
|
|
|
|
|
|
|
|
|
4-Egg_Male
|
1.00
|
|
|
|
|
|
|
|
|
13-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
28-Egg
|
0.96
|
|
|
Yes
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
17-Not_Clustered
|
0.68
|
|
|
|
|
|
|
|
|
17-Not_Clustered
|
0.56
|
|
|
|
|
|
|
|
|
27-ppJ2_pJ2_J3_J4_Female_Male
|
1.00
|
|
|
Yes
|
|
|
|
|
|
23-Female
|
1.00
|
|
|
|
|
|
|
|
|
12-Not_Clustered
|
0.63
|
|
|
|
|
|
|
|
|
17-Not_Clustered
|
0.65
|
|
|
|
|
|
|
|
|
7-ppJ2
|
1.00
|
|
|
|
|
|
|
|
|
26-Not_Clustered
|
0.96
|
|
|
|
|
|
|
|
|
26-J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
18-Not_Clustered
|
0.91
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
10-Pre_planta
|
1.00
|
|
|
|
|
|
|
|
|
14-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
5-Not_Clustered
|
0.69
|
|
|
|
|
|
|
|
|
28-Egg
|
1.00
|
|
|
|
|
|
|
|
|
28-Not_Clustered
|
0.86
|
|
|
|
|
|
|
|
|
2-pJ2_J3_J4_Female
|
1.00
|
|
|
|
|
|
|
|
|
5-Not_Clustered
|
0.96
|
|
|
|
|
|
|
|
|
28-Not_Clustered
|
0.36
|
|
|
|
|
|
|
|
|
7-ppJ2
|
1.00
|
|
|
|
|
|
|
|
|
23-Female
|
1.00
|
|
|
|
|
|
|
|
|
1-Not_Clustered
|
0.79
|
|
|
|
|
|
|
|
|
18-ppJ2_pJ2_J3_J4_Male
|
0.99
|
|
|
|
|
|
|
|
|
20-Egg_ppJ2_pJ2_J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
6-pJ2_J3_J4_Male
|
0.97
|
|
|
|
|
|
|
|
|
10-Pre_planta
|
1.00
|
|
|
|
|
|
|
|
|
15-Male
|
1.00
|
|
|
|
|
|
|
|
|
5-pJ2_J3_J4
|
1.00
|
|
|
|
|
|
|
|
|
4-Not_Clustered
|
0.96
|
|
|
|
|
|
|
|
|
25-Not_Clustered
|
0.64
|
|
|
|
|
|
|
|
|
3-Not_described
|
1.00
|
|
|
|
|
|
|
|
|
10-Pre_planta
|
0.99
|
|
|
|
|
|
|
|
|
7-ppJ2
|
0.97
|
|
|
|
|
|
|
|
|
18-Not_Clustered
|
0.77
|
|
|
|
|
|
|
|
|
13-Not_described
|
0.98
|
|
|
|
|
|
|
|
|
17-Not_Clustered
|
0.84
|
|
|
|
|
|
|
|
|
12-ppJ2_pJ2_J3_Females
|
0.99
|
|
|
|
|
|
|
|
|
14-Not_described
|
0.99
|
|
|
|
|
|
|
|
|
28-Egg
|
0.97
|