Filters
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729 (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core
Genomics
Effectors
Secretion
Homology
Functional
Sequence
Structure
Biophysics
Composition
Expression
DGE
| Gene Name | Gene Locus | Nested Gene | (host gene) | Average | TN7 | TN8 | TN10 | TN20 | TN22 | MM26 | OP50 | PA3 | X12 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Hg_chrom1_TN10gene_371
|
chr1:5396115-5396735
|
|
|
3.33
|
5.00
|
2.00
|
1.00
|
4.00
|
4.00
|
4.00
|
5.00
|
3.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_371
|
chr1:5396115-5397257
|
|
|
3.22
|
3.00
|
2.00
|
1.00
|
4.00
|
5.00
|
5.00
|
5.00
|
2.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_372
|
chr1:5398003-5399054
|
|
|
1.78
|
2.00
|
2.00
|
1.00
|
2.00
|
1.00
|
1.00
|
2.00
|
3.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_39
|
chr1:349736-350258
|
|
|
2.22
|
3.00
|
3.00
|
1.00
|
5.00
|
3.00
|
1.00
|
2.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_373
|
chr1:5423746-5424633
|
|
|
1.11
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_374
|
chr1:5426570-5429463
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_375
|
chr1:5429852-5431611
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_376
|
chr1:5433467-5443450
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_377
|
chr1:5444552-5446049
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_378
|
chr1:5447913-5449301
|
|
|
1.11
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_379
|
chr1:5450211-5451080
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_380
|
chr1:5484199-5484648
|
|
|
0.22
|
|
1.00
|
1.00
|
|
|
|
|
|
|
|
|
Hg_chrom1_TN10gene_381
|
chr1:5492107-5493242
|
|
|
2.22
|
2.00
|
1.00
|
1.00
|
3.00
|
4.00
|
3.00
|
2.00
|
2.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_382
|
chr1:5508798-5510325
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
|
1.00
|
1.00
|
2.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_4
|
chr1:103500-115395
|
|
|
1.11
|
1.00
|
2.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_40
|
chr1:351283-352375
|
|
|
1.44
|
1.00
|
1.00
|
2.00
|
1.00
|
1.00
|
1.00
|
2.00
|
2.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_383
|
chr1:5510397-5512686
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_384
|
chr1:5536060-5542625
|
|
|
1.22
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
1.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_385
|
chr1:5567867-5569255
|
|
|
1.11
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_386
|
chr1:5572060-5584232
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_386
|
chr1:5572070-5584232
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_387
|
chr1:5602198-5606410
|
|
|
1.22
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
3.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_388
|
chr1:5623552-5624872
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_389
|
chr1:5638211-5640368
|
|
|
1.67
|
2.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
3.00
|
3.00
|
|
|
Hg_chrom1_TN10gene_390
|
chr1:5640747-5641863
|
|
|
2.67
|
3.00
|
2.00
|
2.00
|
1.00
|
3.00
|
5.00
|
1.00
|
2.00
|
5.00
|
|
|
Hg_chrom1_TN10gene_390
|
chr1:5640886-5642459
|
|
|
1.44
|
1.00
|
2.00
|
1.00
|
1.00
|
1.00
|
2.00
|
2.00
|
2.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_41
|
chr1:353878-354784
|
|
|
1.11
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_391
|
chr1:5643515-5645271
|
|
|
1.33
|
1.00
|
2.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
2.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_392
|
chr1:5666445-5667061
|
|
|
1.33
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
3.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_392
|
chr1:5666445-5667275
|
|
|
1.11
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_393
|
chr1:5732039-5734935
|
|
|
1.33
|
2.00
|
2.00
|
1.00
|
1.00
|
2.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_394
|
chr1:5746770-5747715
|
|
|
1.33
|
1.00
|
1.00
|
2.00
|
1.00
|
1.00
|
3.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_395
|
chr1:5885508-5888654
|
|
|
1.67
|
2.00
|
2.00
|
1.00
|
2.00
|
1.00
|
2.00
|
2.00
|
2.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_396
|
chr1:5912312-5913247
|
|
|
2.11
|
1.00
|
2.00
|
3.00
|
2.00
|
2.00
|
3.00
|
1.00
|
2.00
|
3.00
|
|
|
Hg_chrom1_TN10gene_397
|
chr1:5940883-5942810
|
|
|
1.11
|
2.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_398
|
chr1:5943246-5944251
|
|
|
1.78
|
3.00
|
1.00
|
1.00
|
2.00
|
2.00
|
1.00
|
4.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_399
|
chr1:5973323-5974034
|
|
|
1.33
|
1.00
|
2.00
|
2.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_42
|
chr1:357795-363159
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_400
|
chr1:6064671-6066551
|
|
|
1.33
|
1.00
|
1.00
|
1.00
|
2.00
|
1.00
|
1.00
|
1.00
|
2.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_401
|
chr1:6173552-6175056
|
|
|
1.78
|
2.00
|
1.00
|
1.00
|
2.00
|
2.00
|
2.00
|
1.00
|
3.00
|
2.00
|
|
|
Hg_chrom1_TN10gene_402
|
chr1:6175094-6175937
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_403
|
chr1:6176139-6177143
|
|
|
0.89
|
1.00
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_404
|
chr1:6180836-6183566
|
|
|
1.11
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
2.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_405
|
chr1:6207441-6208315
|
|
|
0.89
|
1.00
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_406
|
chr1:6269648-6269927
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_407
|
chr1:6329669-6340427
|
|
|
1.33
|
1.00
|
2.00
|
1.00
|
1.00
|
1.00
|
2.00
|
2.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_408
|
chr1:6408117-6409274
|
|
|
0.78
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_408
|
chr1:6408182-6409575
|
|
|
0.56
|
|
|
1.00
|
2.00
|
1.00
|
|
1.00
|
|
|
|
|
Hg_chrom1_TN10gene_43
|
chr1:367208-367803
|
|
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|
|
Hg_chrom1_TN10gene_409
|
chr1:6417534-6418635
|
|
|
0.89
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
1.00
|
|