Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal
cytoplasm
KRKL,KRAKQELEKAKRKTE,KKQKGFDKIIDEWRKKCD,RRHQETDKNYRKAERRVKE
0.00
0.22
0.22
0.02
0.73
0.05
0.11
0.18
0.01
0.34
0.05
not_secreted
cytoplasm
KRLSPVISKMELEYLRKKH
52-72
1.00
76-98
1.00
0.00
0.37
0.10
0.02
0.66
0.10
0.22
0.31
0.19
0.13
0.12
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
1-24
0.96
0.00
0.15
0.52
0.13
0.22
0.86
0.21
0.33
0.44
0.30
0.13
not_secreted
nucleus
37-67
0.94
0.00
0.59
0.26
0.04
0.38
0.08
0.05
0.02
0.03
0.03
0.16
membrane_bound
signal_peptide|transmembrane_domain
endoplasmic_reticulum
1-26
0.96
1.00
1
1.00
0.15
0.35
0.01
0.16
0.87
0.11
0.28
0.21
0.26
0.01
not_secreted
mitochondrial_transit_peptide
mitochondrion
KKIIRLLADGVVNRWTRK
49-82
0.99
5-25
0.99
0.00
0.06
0.97
0.05
0.11
0.03
0.05
0.05
0.04
0.03
0.03
secreted
nucleus
1-26
1.00
1.00
0
0.00
0.47
0.20
0.12
0.44
0.13
0.02
0.05
0.11
0.18
0.42
not_secreted
signal_peptide
extracellular
KRRRHRTH,RKIWQKGTAKKRTKRW
30-50
1.00
0.24
0.30
0.35
0.00
0.08
0.11
0.02
0.09
0.03
0.06
0.86
not_secreted
cytoplasm|lysosome_vacuole
RKWPFRLSEQQLDSRRRML
20-50
0.98
0.00
0.33
0.22
0.02
0.60
0.23
0.71
0.28
0.00
0.51
0.09
membrane_bound
signal_peptide|transmembrane_domain
cell_membrane|lysosome_vacuole
chloroplast
82-125
0.97
0.63
0.31
1
0.21
0.04
0.02
0.21
0.25
0.75
0.49
0.12
0.64
0.14
not_secreted
nuclear_localization_signal
nucleus
KRRS,RRAEGMKDNNSSKREGR
54-94
0.88
26-85
0.99
0.00
0.54
0.19
0.06
0.31
0.11
0.02
0.04
0.00
0.14
0.47
membrane_bound
signal_peptide
cell_membrane
chloroplast
RKRRRKRHKKEKK
58-80
1.00
0.61
0.13
1
0.09
0.08
0.01
0.19
0.18
0.19
0.44
0.09
0.75
0.31
not_secreted
nuclear_export_signal
cytoplasm
0.00
0.44
0.24
0.01
0.63
0.13
0.35
0.38
0.07
0.38
0.03
secreted
extracellular
1-34
0.91
1.00
0
0.00
0.20
0.39
0.10
0.30
0.17
0.26
0.16
0.06
0.32
0.83
not_secreted
cytoplasm
0.00
0.42
0.37
0.07
0.48
0.14
0.05
0.09
0.40
0.17
0.17
not_secreted
transmembrane_domain
cell_membrane
RRRR
43-63
1.00
3-68
0.90
0.00
0.19
0.14
0.01
0.19
0.21
0.41
0.19
0.01
0.65
0.15
not_secreted
cytoplasm|golgi_apparatus
0.00
0.46
0.07
0.02
0.55
0.20
0.56
0.68
0.24
0.06
0.07
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
KKTEEEGNSKQKRKSDK,SKQKRKSDKHKQKMKSKSPK
0.01
0.24
0.30
0.03
0.17
0.78
0.13
0.14
0.01
0.24
0.04
secreted
signal_peptide|transmembrane_domain
cell_membrane
chloroplast
23-45
0.96
1-20
1.00
1.00
0
0.00
0.13
0.05
0.01
0.34
0.29
0.50
0.45
0.09
0.76
0.12
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
KSARKMAEERREKVEGQRGKTRGENG
53-74
1.00
4-25
0.99
0.00
0.23
0.10
0.06
0.28
0.25
0.43
0.25
0.08
0.55
0.20
secreted
extracellular
nucleus
KRSSAGGGGEAMRRAKA
1-21
0.94
1.00
0
0.00
0.23
0.45
0.19
0.11
0.14
0.01
0.05
0.01
0.05
0.94
not_secreted
nuclear_export_signal
cytoplasm
24-48
0.94
0.00
0.23
0.21
0.06
0.63
0.12
0.56
0.43
0.08
0.28
0.10
not_secreted
peroxisomal_targeting_signal
cytoplasm
KRIR
0.00
0.20
0.31
0.02
0.76
0.15
0.27
0.13
0.18
0.21
0.03
membrane_bound
transmembrane_domain
cell_membrane
1-25
0.79
0.54
4
4.00
0.07
0.07
0.01
0.16
0.24
0.15
0.20
0.01
0.85
0.03
not_secreted
nuclear_localization_signal
nucleus
RKQNERRENEIRKMREK,RRPREAEDHQLTDEDKDRR,RRERNKQAAARCRRRREEK,KDRRAKRRERNKQAAARCRRRREE
0.00
0.89
0.13
0.01
0.33
0.03
0.02
0.03
0.01
0.05
0.02
not_secreted
cytoplasm
3-54
0.79
0.00
0.47
0.38
0.01
0.53
0.21
0.06
0.05
0.01
0.22
0.26
membrane_bound
signal_peptide|transmembrane_domain
cell_membrane
chloroplast
RRKMKYIVNGTVGRRRKKD,RKMKYIVNGTVGRRRKKDK,GRRRKKDKSAEKEKEKRRETKA
28-48
0.97
56-76
0.98
1-21
0.95
1.00
1
1.00
0.13
0.01
0.01
0.27
0.24
0.37
0.53
0.18
0.81
0.07
not_secreted
transmembrane_domain
cell_membrane
65-85
0.99
29-49
0.97
0.00
0.09
0.06
0.01
0.10
0.39
0.14
0.12
0.03
0.82
0.06
not_secreted
transmembrane_domain
cell_membrane
30-70
0.87
0.00
0.07
0.05
0.02
0.10
0.35
0.14
0.11
0.06
0.86
0.04
not_secreted
nuclear_localization_signal
cytoplasm
RRQKSTTGWMRGEKSKRKG,RGEKSKRKGTKRTEEAESGGRGGGKAGKEKAKSGGREGGKAGEEEAEKRGKEKAEKRGEEEAEKRGKEKAEKRGKEKAEKRGEEEAEKRGKEEAEKRKKDKG
4-39
0.81
0.16
0.34
0.13
0.01
0.65
0.18
0.13
0.20
0.00
0.28
0.27
not_secreted
nuclear_localization_signal
nucleus
KRQK,KRKVTFSSESKVVRK,GEKGKEKEEKGGKEAEKDKQKAEEGTELSKKAKKIRAKRKGEAGK
0.00
0.89
0.07
0.01
0.34
0.05
0.01
0.07
0.00
0.07
0.05
not_secreted
cytoplasm
RRRTKSQMIAEEAKRIRT,KRKGNGTAYFIGKMRKLER
71-92
0.99
0.00
0.33
0.16
0.01
0.72
0.08
0.28
0.19
0.05
0.17
0.05
not_secreted
transmembrane_domain
cell_membrane
0.00
0.06
0.12
0.03
0.09
0.26
0.40
0.37
0.01
0.79
0.04
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
16-57
0.94
0.00
0.04
0.12
0.04
0.07
0.33
0.49
0.38
0.01
0.75
0.04
not_secreted
signal_peptide|transmembrane_domain
lysosome_vacuole
26-56
0.98
44-80
0.94
0.00
0.19
0.02
0.04
0.30
0.40
0.65
0.40
0.08
0.55
0.10
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRRP,KKESEGDDKEEQKKEKRG
0.00
0.64
0.16
0.01
0.58
0.14
0.17
0.14
0.05
0.14
0.04
not_secreted
mitochondrion
15-35
1.00
1-21
0.97
0.00
0.37
0.56
0.02
0.45
0.06
0.03
0.04
0.21
0.08
0.41
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.81
0.29
0.04
0.50
0.08
0.20
0.19
0.06
0.04
0.09
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRRRREATSAIRNKYK
3-38
0.98
0.00
0.86
0.10
0.01
0.51
0.03
0.03
0.03
0.03
0.09
0.04
not_secreted
nuclear_export_signal
cytoplasm|nucleus
RKHFVKMFFKRRKEP
26-74
0.89
0.00
0.63
0.10
0.01
0.54
0.31
0.33
0.35
0.03
0.21
0.07
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.53
0.22
0.02
0.77
0.13
0.16
0.16
0.04
0.17
0.04
not_secreted
mitochondrial_transit_peptide
mitochondrion
KKPR
23-44
0.99
18-38
0.99
0.00
0.14
0.85
0.04
0.13
0.08
0.08
0.06
0.07
0.08
0.01
not_secreted
transmembrane_domain
endoplasmic_reticulum
10-42
0.79
0.00
0.30
0.30
0.01
0.21
0.78
0.41
0.54
0.03
0.13
0.08
not_secreted
mitochondrion
0.00
0.23
0.85
0.08
0.32
0.38
0.15
0.13
0.38
0.16
0.09
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.59
0.17
0.07
0.54
0.10
0.13
0.08
0.02
0.10
0.07
not_secreted
cytoplasm
0.00
0.26
0.31
0.01
0.73
0.11
0.07
0.14
0.03
0.09
0.04
not_secreted
nuclear_localization_signal
nucleus
KKASLGRICKICKRRVA
38-61
0.99
17-52
0.99
0.00
0.80
0.19
0.01
0.43
0.07
0.11
0.12
0.07
0.06
0.02
not_secreted
cytoplasm|cell_membrane
RRKEKHRKMELEREKMR
0.00
0.20
0.39
0.07
0.50
0.25
0.31
0.53
0.02
0.57
0.13
not_secreted
transmembrane_domain
cell_membrane
RREFIETMRELRRKNP,RRLVGGGDIVRKRLER,KKMSDMSKVQERFQRRLER
0.00
0.09
0.24
0.01
0.11
0.47
0.32
0.31
0.01
0.86
0.01
secreted
nuclear_localization_signal
nucleus|extracellular
1-30
1.00
1.00
0
0.00
0.61
0.29
0.01
0.30
0.23
0.04
0.06
0.01
0.16
0.78