Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm
0.00
0.50
0.30
0.07
0.65
0.15
0.24
0.19
0.03
0.14
0.03
not_secreted
mitochondrion
0.00
0.34
0.69
0.02
0.47
0.37
0.24
0.24
0.01
0.19
0.15
secreted
extracellular
1-19
1.00
1.00
0
0.00
0.32
0.14
0.03
0.25
0.09
0.04
0.07
0.03
0.27
0.78
not_secreted
nuclear_localization_signal
cytoplasm
KKYLTKDVVDACKDKRTKL
0.00
0.30
0.47
0.07
0.80
0.15
0.13
0.18
0.01
0.27
0.11
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.69
0.24
0.01
0.58
0.14
0.18
0.12
0.02
0.07
0.04
not_secreted
nuclear_localization_signal
nucleus
0.00
0.73
0.21
0.01
0.47
0.07
0.05
0.05
0.13
0.17
0.17
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.65
0.16
0.01
0.54
0.11
0.08
0.05
0.01
0.04
0.26
not_secreted
nuclear_localization_signal
nucleus
RKYWRCEFFGPNNKCKGR
0.00
0.83
0.17
0.12
0.41
0.06
0.03
0.03
0.01
0.19
0.23
not_secreted
nuclear_export_signal
nucleus
0.00
0.79
0.46
0.03
0.31
0.29
0.17
0.09
0.07
0.08
0.21
not_secreted
nuclear_localization_signal
nucleus
RKSLVDRVNEVEQKKKAV,KKHELKDNLLINVIKLRRL
0.00
0.84
0.08
0.02
0.39
0.04
0.07
0.08
0.05
0.05
0.05
not_secreted
mitochondrial_transit_peptide
mitochondrion
RRENFNRNRPRLLKRNEK
3-40
0.97
8-48
1.00
0.05
0.08
0.90
0.27
0.21
0.03
0.03
0.06
0.02
0.06
0.08
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
RRESEEEEEKEEGMKRRGG,RMKGKEREEKERREGTEKEEEKEGANGKEERGERKEQFEDNKEAKNGKIGAKGGEEREAEKEPKKQRMRANGRA
0.00
0.12
0.05
0.02
0.24
0.26
0.37
0.21
0.01
0.88
0.34
secreted
cytoplasm|extracellular
1-28
0.91
0.79
0
0.00
0.38
0.53
0.04
0.54
0.22
0.14
0.07
0.08
0.20
0.68
not_secreted
nuclear_localization_signal
cytoplasm
RRDAHELGTIRRERE,RRRFINSLLKEIRRSKD
0.00
0.39
0.18
0.01
0.67
0.07
0.15
0.07
0.04
0.15
0.08
secreted
signal_peptide
extracellular
nucleus
RKKR,RRSDARNYLILRKKNG
1-16
0.99
1.00
0
0.00
0.28
0.17
0.07
0.26
0.23
0.10
0.14
0.04
0.34
0.60
not_secreted
cytoplasm
KKRP,KKKAPPNNARVARRPRDLRG
0.00
0.26
0.23
0.03
0.61
0.18
0.35
0.31
0.04
0.32
0.03
not_secreted
transmembrane_domain
golgi_apparatus
70-109
0.95
0.00
0.08
0.19
0.02
0.07
0.61
0.31
0.75
0.01
0.17
0.03
not_secreted
cytoplasm
KRMFQENKLAWRRVYK
0.00
0.21
0.08
0.03
0.57
0.34
0.47
0.65
0.09
0.23
0.05
not_secreted
cytoplasm
RRFPQRIFIDLPDKKARF
0.00
0.48
0.43
0.02
0.50
0.08
0.13
0.12
0.20
0.07
0.09
not_secreted
nuclear_localization_signal
nucleus
PKRKRRN,RKRRNLTAEFKSCGNTKRK,KRRNLTAEFKSCGNTKRKK,RRNLTAEFKSCGNTKRKKY
0.00
0.95
0.08
0.01
0.16
0.01
0.02
0.02
0.03
0.04
0.00
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.70
0.44
0.02
0.51
0.13
0.06
0.11
0.07
0.08
0.11
not_secreted
nuclear_export_signal
cytoplasm|nucleus
RKLSTIALALGVERTRKE
0.00
0.54
0.11
0.01
0.66
0.20
0.18
0.18
0.13
0.35
0.02
not_secreted
nuclear_export_signal
nucleus
0.00
0.73
0.13
0.01
0.41
0.20
0.14
0.07
0.03
0.09
0.01
not_secreted
mitochondrial_transit_peptide
mitochondrion
1-21
0.99
11-33
0.99
0.00
0.14
0.91
0.02
0.23
0.05
0.06
0.04
0.01
0.05
0.02
not_secreted
nuclear_export_signal
cytoplasm
0.00
0.41
0.43
0.16
0.69
0.33
0.14
0.18
0.10
0.13
0.08
secreted
signal_peptide
extracellular
nucleus
RKRCGLEPENLISRRRKRQ,KRCGLEPENLISRRRKRQF
1-17
1.00
1.00
0
0.00
0.29
0.19
0.05
0.23
0.25
0.12
0.17
0.05
0.26
0.60
not_secreted
mitochondrial_transit_peptide
cytoplasm|mitochondrion
13-35
0.96
0.00
0.17
0.71
0.13
0.56
0.05
0.09
0.11
0.14
0.08
0.18
not_secreted
transmembrane_domain
golgi_apparatus
RRRK,RRRTIRRTSDGPKREGK
15-39
0.98
0.00
0.13
0.24
0.06
0.10
0.39
0.15
0.60
0.09
0.16
0.04
not_secreted
nuclear_localization_signal
nucleus
KRVK,RVKKRRQ,RRRRKEFEDNIRKNRM,RKILGTAIGKCPKKKLFR,KKFGERLRIEGVIFSKRRH
0.00
0.79
0.06
0.01
0.33
0.06
0.06
0.09
0.01
0.11
0.10
not_secreted
nucleus
RIRKRRY,RKRRYSQARIQPTRVKKV
40-66
1.00
0.01
0.42
0.40
0.20
0.31
0.15
0.08
0.22
0.03
0.08
0.14
not_secreted
nuclear_localization_signal
nucleus
RKSMQKRWDKRDGRR,RKISRNKLYGRKSMQKRWDKRDG
0.00
0.79
0.36
0.09
0.41
0.08
0.07
0.13
0.01
0.06
0.18
not_secreted
endoplasmic_reticulum
0.00
0.29
0.60
0.07
0.23
0.67
0.29
0.33
0.68
0.23
0.05
not_secreted
mitochondrion|endoplasmic_reticulum
0.00
0.26
0.62
0.10
0.23
0.66
0.21
0.18
0.56
0.19
0.04
not_secreted
nuclear_localization_signal
nucleus
PPYKRKW
6-26
0.93
33-53
0.98
0.00
0.85
0.19
0.06
0.33
0.03
0.01
0.01
0.02
0.04
0.09
not_secreted
cytoplasm|lysosome_vacuole
0.00
0.32
0.30
0.02
0.60
0.22
0.65
0.43
0.00
0.23
0.10
not_secreted
signal_peptide
extracellular
RRVRRRMKRWWRRVRE
0.00
0.31
0.10
0.01
0.40
0.18
0.05
0.12
0.00
0.22
0.84
secreted
signal_peptide
cytoplasm
nucleus
KVKK,RRRRRRKRRNA
1-18
1.00
1.00
0
0.00
0.27
0.15
0.01
0.46
0.28
0.17
0.21
0.02
0.32
0.21
not_secreted
peroxisomal_targeting_signal
peroxisome
6-36
1.00
0.00
0.15
0.50
0.01
0.25
0.06
0.06
0.09
0.80
0.04
0.03
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRGKK
0.00
0.52
0.19
0.00
0.83
0.17
0.08
0.10
0.01
0.13
0.02
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
RRGKK
0.00
0.58
0.15
0.00
0.79
0.22
0.08
0.11
0.01
0.09
0.02
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm
0.00
0.47
0.24
0.08
0.77
0.08
0.20
0.13
0.06
0.15
0.02
secreted
extracellular
nucleus
KRGQKETFHEKRKTN
1-40
0.53
0.61
0
0.00
0.50
0.51
0.05
0.21
0.11
0.13
0.19
0.02
0.28
0.90
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
25-48
0.94
0.00
0.68
0.18
0.02
0.60
0.16
0.21
0.18
0.05
0.13
0.11
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRMKVTMDDMRKAKE,RKIEFPLPDEKTKRRIF,RKPGDDKGQDPEKKRKYH,KPGDDKGQDPEKKRKYHGPPVPTRIGKRKKGSRG
0.00
0.55
0.07
0.02
0.56
0.37
0.05
0.09
0.01
0.22
0.02
not_secreted
nuclear_localization_signal
nucleus
RFKPSQKDGELLPRRKRKL
10-30
1.00
0.00
0.59
0.53
0.46
0.31
0.02
0.01
0.02
0.10
0.04
0.15
not_secreted
nuclear_localization_signal
cytoplasm
AQKVPKKAKPKEEG,KRGEKAVKTAPDREEKK,RKESKDTTAQKVPKKAKPK
0.00
0.32
0.10
0.01
0.74
0.07
0.08
0.17
0.01
0.25
0.07
not_secreted
cytoplasm|nucleus
0.00
0.60
0.22
0.03
0.57
0.20
0.09
0.09
0.16
0.07
0.22
not_secreted
cytoplasm
16-46
0.98
77-97
1.00
0.26
0.43
0.42
0.16
0.55
0.11
0.04
0.16
0.04
0.05
0.37
not_secreted
transmembrane_domain
cell_membrane|lysosome_vacuole
0.00
0.04
0.12
0.02
0.12
0.51
0.59
0.52
0.01
0.60
0.01
not_secreted
cytoplasm
26-46
1.00
0.00
0.50
0.24
0.03
0.76
0.30
0.12
0.17
0.02
0.05
0.11