Filters

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Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.48
0.16
0.04
0.60
0.10
0.13
0.12
0.05
0.10
0.11
not_secreted
transmembrane_domain
lysosome_vacuole
0.00
0.29
0.42
0.01
0.26
0.44
0.55
0.31
0.04
0.41
0.04
not_secreted
mitochondrion|endoplasmic_reticulum
0.00
0.23
0.78
0.09
0.09
0.61
0.06
0.14
0.48
0.13
0.02
not_secreted
nuclear_localization_signal
nucleus
KGKKKRGKG
0.00
0.75
0.31
0.03
0.42
0.08
0.16
0.18
0.03
0.04
0.04
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
PWTKRNK
25-53
0.98
0.00
0.18
0.27
0.04
0.20
0.89
0.53
0.64
0.01
0.20
0.09
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.68
0.20
0.05
0.52
0.40
0.29
0.13
0.01
0.27
0.19
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.34
0.39
0.04
0.81
0.14
0.09
0.14
0.00
0.22
0.11
not_secreted
mitochondrial_transit_peptide
mitochondrion
0.00
0.08
0.96
0.01
0.11
0.04
0.02
0.02
0.01
0.03
0.02
not_secreted
cytoplasm|nucleus
0.00
0.55
0.61
0.43
0.64
0.13
0.03
0.03
0.03
0.16
0.25
secreted
nuclear_localization_signal
cytoplasm|nucleus
1-17
0.97
0.93
0
0.00
0.56
0.32
0.06
0.49
0.05
0.02
0.02
0.01
0.11
0.27
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.59
0.36
0.01
0.74
0.12
0.23
0.07
0.02
0.15
0.03
not_secreted
nuclear_localization_signal
nucleus
KVKRTKQKRRHSPAKSESKE
0.00
0.82
0.17
0.03
0.31
0.02
0.01
0.05
0.02
0.05
0.05
not_secreted
nuclear_localization_signal
cytoplasm
RRRK,ERKKDKVLHKLGRRNKQK,KRKPNILQILIQRRKRYKN,RKPNILQILIQRRKRYKNR
0.00
0.37
0.22
0.03
0.62
0.17
0.40
0.30
0.05
0.39
0.05
not_secreted
nuclear_localization_signal
nucleus
KMKRRKEKEDKEK,KKIMSGEKILPLRRQEK,KRKRDEEERAAKRKTKRT,RRYNFKAEEKAQKLAKRKR,KRKTKRTDEEGNVERHEKK,KKQQLVDTNDVRSEVVRRK,RKAALTLLKAPFVLKTKHK
0.00
0.63
0.19
0.01
0.40
0.09
0.07
0.09
0.00
0.05
0.02
membrane_bound
signal_peptide|transmembrane_domain
endoplasmic_reticulum|golgi_apparatus
1-33
0.89
1.00
0.04
0.16
0.01
0.18
0.73
0.33
0.74
0.09
0.44
0.01
membrane_bound
signal_peptide|transmembrane_domain
endoplasmic_reticulum|golgi_apparatus
1-33
0.89
1.00
0.04
0.16
0.01
0.18
0.73
0.33
0.74
0.09
0.44
0.01
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RKRFDSHRRGKKRRRNN
0.00
0.80
0.14
0.00
0.68
0.06
0.05
0.04
0.01
0.03
0.01
not_secreted
cytoplasm
RRHLLDRVVQEKAEKQRKL,RREIERIQNQQLAVRDKAR
0.01
0.39
0.13
0.01
0.68
0.14
0.22
0.23
0.17
0.21
0.22
secreted
cytoplasm
nucleus
RRMPCTSTDQRVGKK,RRFPQRIFIDLPDKKARF
0.62
0.01
0
0.45
0.22
0.00
0.59
0.03
0.23
0.14
0.11
0.10
0.02
not_secreted
nuclear_localization_signal
nucleus
KKKK,KKKQCLLEAVFYPKNSKRR,KKQCLLEAVFYPKNSKRRS
0.00
0.89
0.13
0.01
0.41
0.05
0.03
0.02
0.01
0.06
0.09
not_secreted
mitochondrial_transit_peptide
mitochondrion|endoplasmic_reticulum
KKRP
0.00
0.13
0.73
0.08
0.44
0.79
0.28
0.54
0.01
0.25
0.07
not_secreted
nuclear_localization_signal
cytoplasm
KKRP,KVKK
0.00
0.44
0.13
0.01
0.70
0.13
0.13
0.09
0.02
0.18
0.12
not_secreted
cytoplasm
0.00
0.17
0.50
0.01
0.80
0.17
0.17
0.14
0.05
0.11
0.20
not_secreted
transmembrane_domain
cell_membrane
25-46
0.99
0.00
0.13
0.11
0.01
0.11
0.54
0.42
0.43
0.01
0.66
0.03
secreted
extracellular
1-19
0.97
1.00
0
0.00
0.31
0.31
0.06
0.35
0.09
0.12
0.05
0.10
0.45
0.90
not_secreted
nuclear_localization_signal
nucleus
KKSLVRDEAYWERRRKNN,RRKNNDAAKRSRDSRRKKE,RKNNDAAKRSRDSRRKKED,RRRKNNDAAKRSRDSRRKK
31-100
0.91
50-100
1.00
0.00
0.85
0.20
0.01
0.36
0.10
0.05
0.06
0.01
0.08
0.05
not_secreted
signal_peptide
endoplasmic_reticulum
0.00
0.12
0.42
0.05
0.40
0.75
0.35
0.39
0.00
0.10
0.56
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.41
0.21
0.07
0.65
0.22
0.17
0.18
0.01
0.10
0.03
not_secreted
cytoplasm
0.00
0.30
0.15
0.01
0.61
0.15
0.19
0.13
0.13
0.19
0.28
not_secreted
cytoplasm
RKKK
17-37
0.98
0.00
0.40
0.40
0.06
0.42
0.17
0.13
0.27
0.08
0.17
0.31
not_secreted
nuclear_localization_signal
cytoplasm
KKYLTKDVVDACKDKRTKL
0.00
0.31
0.47
0.07
0.80
0.14
0.13
0.18
0.01
0.26
0.11
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRSIKETRYLEQKQRLKKC
0.00
0.67
0.33
0.02
0.54
0.08
0.16
0.04
0.02
0.06
0.04
not_secreted
nuclear_localization_signal
cytoplasm
KRPR,PMAKRRV,KSKGKNGAERR,RKHSSTNRTTTSGRRRTM
0.00
0.22
0.18
0.03
0.70
0.14
0.26
0.20
0.04
0.46
0.07
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.78
0.29
0.02
0.74
0.40
0.07
0.15
0.02
0.10
0.06
not_secreted
nuclear_localization_signal
nucleus
RKRRDDPFGTLIQSTKKMR,KRRDDPFGTLIQSTKKMRL,RRSHPRGMPRMIRLRRKRR
45-75
0.98
25-54
0.97
0.00
0.94
0.17
0.01
0.39
0.05
0.03
0.02
0.02
0.03
0.07
not_secreted
nuclear_localization_signal|nuclear_export_signal
nucleus
0.00
0.79
0.28
0.02
0.41
0.13
0.17
0.08
0.01
0.07
0.02
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RKRR
29-59
0.94
0.00
0.51
0.21
0.01
0.70
0.11
0.11
0.06
0.02
0.07
0.05
not_secreted
cytoplasm
KAKERRA,KRHNERVERLPLRAFKK,RKSPPTIALPQNNSKKAKE
78-99
0.99
1-52
0.99
0.00
0.16
0.08
0.04
0.71
0.06
0.29
0.23
0.02
0.32
0.11
not_secreted
extracellular|mitochondrion
RKRRRR
0.00
0.30
0.69
0.05
0.10
0.17
0.03
0.06
0.09
0.14
0.99
not_secreted
endoplasmic_reticulum
RKMSGRKKEGPRRRIA,QRKMSGRKKEGPRRRI,KRNGANGGRGTQRRRGD
0.10
0.31
0.09
0.03
0.24
0.50
0.22
0.35
0.01
0.22
0.22
not_secreted
signal_peptide
extracellular
17-58
0.82
0.01
0.17
0.36
0.04
0.33
0.17
0.04
0.25
0.03
0.36
0.51
not_secreted
signal_peptide
extracellular
RRRRRRR,RRHQREFASLRKSRQ
0.00
0.26
0.22
0.02
0.19
0.13
0.03
0.13
0.04
0.14
0.84
secreted
mitochondrion
1-33
1.00
1.00
0
0.00
0.44
0.60
0.26
0.18
0.20
0.11
0.06
0.01
0.24
0.57
not_secreted
nuclear_localization_signal
nucleus
RKSGVDPLFPSLLRKRKAN
0.00
0.81
0.05
0.01
0.43
0.12
0.14
0.14
0.01
0.11
0.03
not_secreted
lysosome_vacuole
0.00
0.17
0.47
0.07
0.39
0.23
0.56
0.20
0.11
0.23
0.14
not_secreted
cytoplasm
0.00
0.32
0.19
0.02
0.60
0.25
0.33
0.37
0.17
0.21
0.16
not_secreted
cytoplasm
0.00
0.35
0.23
0.01
0.49
0.13
0.41
0.36
0.03
0.13
0.09
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
PPPKRNK,PPKRNKEKKVSRVKGSAA
0.00
0.52
0.18
0.00
0.64
0.19
0.15
0.18
0.01
0.19
0.10
secreted
nuclear_localization_signal
cytoplasm|nucleus
RRRRKR
1-25
0.94
1.00
0
0.00
0.73
0.26
0.00
0.80
0.09
0.07
0.06
0.09
0.09
0.06
not_secreted
nuclear_localization_signal
nucleus
KRQK,RRVFDEPNAFLPELKRKRQ,RLVKKKMKVEVKRELDDSQKEEKQKKKEEKRRKRERRRKEKER
0.00
0.95
0.10
0.01
0.21
0.05
0.01
0.04
0.01
0.01
0.05