Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
signal_peptide
extracellular
4-38
1.00
0.00
0.18
0.18
0.02
0.21
0.39
0.17
0.25
0.02
0.14
0.81
not_secreted
nuclear_export_signal
cytoplasm|nucleus
RRRR
58-82
1.00
0.00
0.69
0.22
0.00
0.61
0.15
0.13
0.13
0.06
0.11
0.03
not_secreted
signal_peptide|transmembrane_domain
extracellular|golgi_apparatus
RRPLSRAALWCRPRRRCF
38-60
0.99
24-47
1.00
0.00
0.10
0.04
0.04
0.20
0.41
0.25
0.71
0.02
0.19
0.63
not_secreted
nuclear_localization_signal
cytoplasm|cell_membrane
KKKK,RRKEEAAPEKEKKKFL
0.00
0.40
0.13
0.01
0.67
0.25
0.35
0.21
0.02
0.60
0.12
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.53
0.34
0.01
0.63
0.12
0.30
0.14
0.04
0.11
0.04
not_secreted
nuclear_localization_signal
nucleus
RKRK,RRKR,PAKKRRIAKA,KKEKKKKKREKEKRM
28-48
1.00
0.00
0.96
0.05
0.01
0.22
0.02
0.02
0.02
0.01
0.05
0.02
not_secreted
mitochondrial_transit_peptide
mitochondrion
0.00
0.08
0.94
0.00
0.12
0.03
0.04
0.02
0.03
0.04
0.05
not_secreted
cytoplasm
RKGKG,RRLSESDAEMVEPIKKLQR
0.05
0.46
0.40
0.03
0.66
0.18
0.15
0.23
0.02
0.12
0.15
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.57
0.15
0.08
0.53
0.10
0.10
0.04
0.04
0.09
0.04
not_secreted
nuclear_localization_signal
nucleus
RKKREEGKKREGKRKHS,KKRRQLEQKQKMEEEERKMREEEERKKWEEEERKKREEEERKKWEEEERKKSEEEERKKWEEEERKKREEEERKKSEEEERKKWEEEERKKREEEKRKKREEEERKKREEEKRKKREEEKRKKKEEEERKKCEEKERKKREEGKKREGKRKH
0.00
0.96
0.04
0.00
0.30
0.03
0.02
0.03
0.11
0.06
0.04
not_secreted
nuclear_localization_signal
nucleus
RAAKRRK,RPAGKAAAKRKARRK
79-99
1.00
0.00
0.93
0.15
0.02
0.15
0.01
0.01
0.02
0.01
0.02
0.02
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRRTRVLSKKAP,RKNNEENVKEKRRTRV
58-96
0.95
0.00
0.52
0.11
0.01
0.63
0.11
0.18
0.09
0.02
0.23
0.05
not_secreted
nuclear_localization_signal
nucleus
KKKR,KKKKK,KKKSKKEKKRERKRKHS,SRRRKKEKKKSKKEKKRERKRKH
0.00
0.93
0.06
0.00
0.11
0.04
0.04
0.09
0.02
0.06
0.03
not_secreted
signal_peptide
extracellular
KRGRMHWTVDKEHQKRRMT
0.02
0.13
0.11
0.02
0.32
0.46
0.32
0.41
0.00
0.28
0.72
not_secreted
nucleus
KRVK
0.00
0.57
0.32
0.03
0.46
0.12
0.09
0.11
0.07
0.11
0.27
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.67
0.17
0.01
0.60
0.15
0.13
0.11
0.00
0.08
0.07
secreted
cytoplasm
1-34
0.99
1.00
0
0.00
0.40
0.14
0.01
0.44
0.12
0.21
0.10
0.01
0.02
0.25
secreted
cytoplasm
1-34
0.99
1.00
0
0.00
0.42
0.14
0.00
0.45
0.12
0.21
0.10
0.02
0.03
0.27
not_secreted
nucleus
29-49
1.00
0.00
0.52
0.20
0.14
0.37
0.05
0.07
0.13
0.02
0.12
0.39
membrane_bound
signal_peptide|transmembrane_domain
lysosome_vacuole
chloroplast
RRTRFCPMLHRRKSG
40-119
0.93
1-27
0.94
1.00
1
1.00
0.24
0.03
0.04
0.22
0.25
0.68
0.36
0.05
0.55
0.12
not_secreted
nuclear_localization_signal
nucleus
KRKL,RAKKRTR,NRRAKKR,RKFGAAIQLSERKKNE,KRLQMIKWRAEQEERNRRA,KKRTRQDDDEEGTNGRRRD,KRTRQDDDEEGTNGRRRDA
0.00
0.89
0.10
0.02
0.21
0.03
0.02
0.05
0.04
0.03
0.03
not_secreted
cytoplasm
0.00
0.48
0.14
0.02
0.50
0.08
0.07
0.16
0.11
0.05
0.07
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.85
0.23
0.01
0.52
0.12
0.02
0.07
0.00
0.07
0.11
not_secreted
mitochondrial_transit_peptide
mitochondrion
5-25
1.00
29-49
1.00
0.00
0.10
0.97
0.02
0.13
0.05
0.08
0.16
0.05
0.12
0.06
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.79
0.08
0.00
0.61
0.02
0.06
0.03
0.01
0.10
0.02
not_secreted
nuclear_localization_signal
cytoplasm
KKKK,RRDAKLCPKKKDPKK,KKVAELLKLEETIQKKWEK
61-98
0.97
0.00
0.41
0.31
0.01
0.61
0.18
0.08
0.07
0.00
0.21
0.09
not_secreted
nuclear_export_signal
cytoplasm|lysosome_vacuole
RRAELNRRAKEEKLKKREA
48-70
1.00
0.00
0.27
0.20
0.05
0.52
0.21
0.70
0.45
0.07
0.19
0.04
secreted
extracellular
1-21
0.93
1.00
0
0.00
0.26
0.37
0.12
0.29
0.26
0.06
0.21
0.23
0.08
0.79
not_secreted
nuclear_export_signal
cytoplasm
0.00
0.46
0.27
0.00
0.74
0.34
0.33
0.42
0.01
0.17
0.07
not_secreted
cytoplasm
0.00
0.36
0.20
0.12
0.67
0.21
0.04
0.06
0.02
0.09
0.04
not_secreted
nuclear_localization_signal
nucleus
RRIAQNKKTEQEKRMRE,KRKATESEELPSGIKKSRR,RKATESEELPSGIKKSRR.,HRRDRNIARSRPDKLEKLKRDK
0.00
0.90
0.08
0.01
0.29
0.06
0.02
0.07
0.02
0.04
0.08
not_secreted
nuclear_localization_signal
nucleus
AAAED,RKRPAAIQELLEKKRARL,KKRARLAHNESGSKSERR
0.00
0.92
0.07
0.02
0.28
0.02
0.01
0.03
0.03
0.04
0.10
not_secreted
nucleus
RRLVMDEKRQRRMDR
50-73
1.00
0.00
0.49
0.08
0.00
0.30
0.18
0.05
0.06
0.04
0.04
0.03
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
RKSLSQLADEIAPRRESR
0.00
0.08
0.19
0.01
0.17
0.57
0.38
0.51
0.20
0.66
0.13
not_secreted
signal_peptide
extracellular
9-41
0.88
0.00
0.11
0.21
0.06
0.16
0.28
0.09
0.19
0.01
0.22
0.69
not_secreted
nuclear_localization_signal
cytoplasm
3-33
0.69
0.00
0.43
0.23
0.05
0.63
0.26
0.10
0.18
0.05
0.24
0.25
not_secreted
mitochondrial_transit_peptide
mitochondrion
0.00
0.14
0.95
0.02
0.22
0.05
0.06
0.07
0.01
0.03
0.03
not_secreted
cytoplasm|nucleus
54-74
0.97
0.00
0.50
0.39
0.17
0.63
0.16
0.26
0.17
0.15
0.23
0.13
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
KRRNSHILTGFTFRRRNI
27-66
0.88
37-77
0.92
0.00
0.17
0.32
0.09
0.24
0.89
0.49
0.30
0.01
0.26
0.10
not_secreted
nuclear_export_signal
cytoplasm
KKLEGEATANNRKAKL
0.00
0.35
0.33
0.03
0.71
0.37
0.28
0.39
0.06
0.24
0.11
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
7-28
1.00
0.00
0.60
0.39
0.12
0.53
0.09
0.04
0.07
0.00
0.11
0.28
not_secreted
cytoplasm
0.00
0.23
0.13
0.02
0.63
0.14
0.42
0.29
0.05
0.45
0.06
not_secreted
nuclear_localization_signal
nucleus
KRKR,RKARKRQRKKMGKTA
0.00
0.84
0.17
0.00
0.35
0.03
0.02
0.06
0.04
0.04
0.03
not_secreted
nuclear_localization_signal
nucleus
KRPR,KRQRTEGEDAEGIGKRPKR,QHKRRPSHTKKRLPSPPPVHRDAFPPAKNPSPSRARSPSRNGKSGDAKRTPPRRTHPLPPKTHG
0.00
0.76
0.08
0.02
0.38
0.04
0.03
0.04
0.03
0.09
0.08
not_secreted
nuclear_localization_signal
nucleus
KRPR,KRQRTEGEDAEGIGKRPKR,QHKRRPSHTKKRLPSPPPVHRDAFPPAKNPSPSRARSPSRNGKSGDAKRTPPRRTHPLPPKTHG
0.00
0.76
0.08
0.02
0.38
0.04
0.03
0.04
0.03
0.09
0.08
not_secreted
cytoplasm
0.00
0.35
0.26
0.02
0.63
0.16
0.24
0.32
0.20
0.19
0.13
not_secreted
nuclear_localization_signal
cytoplasm
RHGKRRG
0.00
0.24
0.15
0.03
0.63
0.22
0.35
0.33
0.01
0.52
0.08
not_secreted
nuclear_localization_signal
cytoplasm|cell_membrane
SKRRGGSGR,RRQRPAGRSFDGRRAKS,RKRMQQEKVPVHRRRSL,KKEKEESISAKFIRMPRR
0.00
0.20
0.30
0.04
0.61
0.08
0.14
0.24
0.06
0.60
0.18
not_secreted
cytoplasm
58-85
0.99
0.04
0.30
0.26
0.36
0.48
0.04
0.02
0.03
0.09
0.26
0.42
not_secreted
nuclear_localization_signal
nucleus
0.00
0.52
0.18
0.03
0.46
0.08
0.06
0.13
0.07
0.06
0.12