Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RKKK,RKCDEIVSTIRRRCER,KKQSQQNETMTTNKNSRKK
0.00
0.59
0.23
0.01
0.48
0.06
0.15
0.12
0.02
0.09
0.05
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
DGKPKKESAKARRAREA
20-48
0.94
0.00
0.82
0.09
0.01
0.52
0.06
0.03
0.04
0.01
0.07
0.08
not_secreted
signal_peptide
extracellular
GEGKKEKEEERKEG,KRRKGRGGRRRKKKRGKKE,RRKGRGGRRRKKKRGKKER,RKGRGGRRRKKKRGKKERI
63-83
1.00
0.00
0.06
0.10
0.11
0.22
0.16
0.13
0.28
0.01
0.32
0.83
not_secreted
nuclear_export_signal
cytoplasm|nucleus
13-34
0.99
0.00
0.55
0.19
0.01
0.56
0.11
0.18
0.12
0.09
0.13
0.05
not_secreted
nuclear_localization_signal
nucleus
KSAKRRKL,KKTEDYKSFQRQKSAKRRK,RKAAEETGQKTNEQRQKK.
0.00
0.94
0.05
0.01
0.25
0.01
0.03
0.06
0.01
0.02
0.01
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRRS,APKRKKRRKAQ
19-52
1.00
0.00
0.85
0.25
0.00
0.50
0.03
0.05
0.08
0.03
0.02
0.04
not_secreted
nuclear_localization_signal
nucleus
0.00
0.89
0.05
0.03
0.26
0.03
0.04
0.05
0.01
0.04
0.11
secreted
extracellular
nucleus
KKFHLTRAEEPRRRKRSV
1-19
0.81
1.00
0
0.00
0.31
0.30
0.09
0.20
0.19
0.02
0.11
0.01
0.04
0.73
not_secreted
nuclear_localization_signal
nucleus
KRAKAELKK,RKVFTRFENSSKLRKN,KRHVSVASHNQSLTKRPKV
0.00
0.86
0.20
0.05
0.30
0.03
0.05
0.04
0.00
0.06
0.04
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.54
0.27
0.05
0.51
0.09
0.11
0.10
0.10
0.12
0.06
membrane_bound
signal_peptide|transmembrane_domain
cell_membrane
1-21
0.99
1.00
1
1.00
0.10
0.04
0.01
0.28
0.06
0.35
0.28
0.06
0.94
0.20
not_secreted
nuclear_localization_signal
nucleus
RKPDRTDKLARHRPFRR,RKEIAQLLLENGAKVRAR
0.00
0.57
0.24
0.07
0.34
0.13
0.08
0.06
0.01
0.26
0.09
not_secreted
nuclear_localization_signal
cell_membrane
KKKR
0.00
0.45
0.21
0.01
0.36
0.10
0.29
0.26
0.04
0.72
0.03
not_secreted
nuclear_localization_signal
cytoplasm
KRHQPFSDAAFPKKRHQ
40-74
0.99
0.00
0.34
0.08
0.05
0.43
0.04
0.10
0.04
0.00
0.09
0.08
not_secreted
nuclear_export_signal
cytoplasm
0.00
0.46
0.18
0.02
0.54
0.08
0.35
0.26
0.01
0.37
0.04
not_secreted
nuclear_localization_signal
nucleus
12-32
1.00
0.00
0.84
0.39
0.02
0.41
0.02
0.02
0.08
0.02
0.01
0.11
not_secreted
peroxisomal_targeting_signal
mitochondrion
0.00
0.19
0.63
0.15
0.32
0.57
0.26
0.28
0.13
0.10
0.03
not_secreted
nuclear_localization_signal
nucleus
0.00
0.90
0.14
0.01
0.36
0.02
0.01
0.06
0.00
0.01
0.08
not_secreted
peroxisome
64-84
1.00
0.00
0.06
0.58
0.63
0.18
0.11
0.19
0.05
0.80
0.14
0.07
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum|lysosome_vacuole|golgi_apparatus
KRKNVGGGSATATERERRL,RKNVGGGSATATERERRLR
23-46
0.99
0.00
0.08
0.16
0.06
0.12
0.76
0.72
0.74
0.06
0.17
0.02
not_secreted
nuclear_localization_signal
nucleus
RRCPLTGASKRLAKK,KKRFNPSVRNAKTFQKKKL,KRFNPSVRNAKTFQKKKLK
0.00
0.89
0.01
0.01
0.25
0.05
0.04
0.16
0.02
0.04
0.10
not_secreted
transmembrane_domain
cell_membrane|lysosome_vacuole
0.00
0.12
0.16
0.03
0.14
0.34
0.63
0.37
0.07
0.61
0.06
not_secreted
cytoplasm
0.00
0.35
0.26
0.07
0.62
0.12
0.08
0.08
0.02
0.10
0.21
not_secreted
nuclear_localization_signal
nucleus
KRRR,KRPLDLGQDGSLVDVKRPR
35-56
1.00
0.00
0.92
0.11
0.00
0.36
0.02
0.06
0.04
0.02
0.06
0.04
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm
0.00
0.37
0.29
0.02
0.69
0.07
0.14
0.18
0.01
0.37
0.14
not_secreted
nuclear_localization_signal
cytoplasm
12-32
0.94
0.00
0.36
0.27
0.03
0.68
0.06
0.11
0.15
0.00
0.40
0.15
not_secreted
cytoplasm
KRGSDTEHEASRRAKS
0.00
0.44
0.25
0.01
0.62
0.07
0.17
0.11
0.14
0.15
0.03
not_secreted
cytoplasm
KRGSDTEHEASRRAKS
0.00
0.40
0.26
0.01
0.63
0.07
0.18
0.12
0.14
0.16
0.03
not_secreted
endoplasmic_reticulum
86-120
1.00
0.00
0.26
0.26
0.05
0.40
0.41
0.32
0.27
0.01
0.35
0.25
not_secreted
cytoplasm
57-77
0.99
40-80
1.00
0.00
0.23
0.24
0.05
0.40
0.34
0.32
0.26
0.01
0.36
0.27
not_secreted
transmembrane_domain
cell_membrane
RRRR,RRVAGGRANSKRTRRTRA,RTPRGRRVAGGRANSKRTRRTR
7-28
1.00
0.00
0.09
0.14
0.12
0.12
0.26
0.51
0.26
0.00
0.83
0.04
secreted
nuclear_localization_signal
cytoplasm
nucleus
KREAEQMPLKVNELAKLKK,KERKKREKMEKRAAKRLGRILGMLSGKKGGGGGSQSGRSGGG
1-12
0.94
0.79
0
0.00
0.34
0.15
0.02
0.65
0.12
0.25
0.38
0.04
0.31
0.16
not_secreted
signal_peptide
extracellular
RKVFEFVKSLPSHLRRIVR
0.00
0.05
0.08
0.01
0.15
0.08
0.31
0.32
0.00
0.14
0.97
secreted
nucleus
1-40
0.64
0.95
0
0.00
0.53
0.61
0.12
0.34
0.17
0.13
0.15
0.06
0.09
0.23
not_secreted
peroxisomal_targeting_signal
mitochondrion
RHRR
2-43
0.97
0.00
0.21
0.61
0.12
0.42
0.05
0.21
0.19
0.43
0.21
0.10
not_secreted
nuclear_localization_signal
nucleus
RRHRSSKGAPPR,RRSDSESDRNRRHRS,RRWKDLYEFERKRRAE,RKRRAEVEAELREQRRRLD
16-77
0.79
43-94
0.97
0.00
0.83
0.09
0.01
0.26
0.05
0.02
0.03
0.00
0.06
0.30
not_secreted
signal_peptide|peroxisomal_targeting_signal
extracellular
18-41
0.97
4-42
1.00
0.00
0.36
0.10
0.62
0.42
0.05
0.22
0.49
0.37
0.09
0.96
not_secreted
nuclear_localization_signal
cytoplasm
32-52
0.99
0.00
0.40
0.10
0.02
0.57
0.05
0.26
0.12
0.05
0.23
0.40
not_secreted
cytoplasm|nucleus
RRRK
0.00
0.55
0.43
0.08
0.58
0.15
0.10
0.28
0.02
0.06
0.29
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.27
0.15
0.05
0.72
0.08
0.16
0.17
0.07
0.46
0.07
not_secreted
nuclear_localization_signal
nucleus
KRKR,KKRKLRR,KKMITYSSFVSRRSKF
86-106
1.00
0.00
0.71
0.11
0.06
0.30
0.03
0.06
0.04
0.02
0.17
0.38
membrane_bound
nuclear_localization_signal
nucleus
nucleus
IRRRKRG
1-21
0.97
1.00
1
1.00
0.88
0.41
0.04
0.15
0.22
0.11
0.10
0.10
0.21
0.20
membrane_bound
nucleus
nucleus
KRRRRRFSKLK
1-20
0.99
1.00
1
1.00
0.50
0.45
0.29
0.28
0.09
0.05
0.13
0.17
0.31
0.13
secreted
mitochondrion
0.64
0.29
0
0.31
0.50
0.01
0.47
0.03
0.04
0.08
0.02
0.22
0.39
not_secreted
lysosome_vacuole|golgi_apparatus
KRFLEGEMRNIQRERRV,KKRLDLDAAKSRLKRART,RRVLQKKRLDLDAAKSRLK
0.00
0.19
0.34
0.04
0.47
0.20
0.60
0.69
0.03
0.22
0.11
membrane_bound
mitochondrion
1-28
0.93
0.94
1
1.00
0.33
0.72
0.42
0.31
0.07
0.07
0.02
0.57
0.14
0.36
not_secreted
cytoplasm
0.00
0.38
0.52
0.03
0.49
0.07
0.05
0.09
0.09
0.11
0.24
not_secreted
nuclear_localization_signal
nucleus
KRRP,RHRR,RRRR,RRKRR,KRKKRNNAVGRKKGT,GRKRSARAAAAAPPRQHR,RKKGTAAERRPQRRKRPRL,RKLSAEEHDRANSHRRIHR
9-36
1.00
0.00
0.96
0.05
0.02
0.17
0.03
0.01
0.01
0.02
0.05
0.01
not_secreted
nuclear_localization_signal
nucleus
RGRPKKR
0.00
0.82
0.14
0.06
0.25
0.03
0.11
0.05
0.10
0.09
0.39
not_secreted
nuclear_localization_signal
nucleus
KRIR,RKKK,RKRKH,RKKQRDVYTKVLKAKRT,RRPKKKGGKSTRKRKALK,RKLEEGKLKHLESKRFSK,RKRKKELDFDTTQELKKKR,KRKKELDFDTTQELKKKRD,RKKELDFDTTQELKKKRDD,KKKRDDDDEFGNQTHRRHR,KKRDDDDEFGNQTHRRHRS,KRDDDDEFGNQTHRRHRSR,RRHRSRSPKKSSRHKKHRD,KKMNSMDTPLGTLNKQLKK,FHGKGPGKKQAEKHAAKVVKREKLKK
0.00
0.89
0.04
0.01
0.21
0.06
0.03
0.08
0.00
0.03
0.04