Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
21-58
0.91
0.00
0.09
0.10
0.01
0.18
0.41
0.54
0.39
0.01
0.81
0.03
not_secreted
extracellular
29-50
1.00
12-52
0.67
0.00
0.14
0.10
0.01
0.11
0.16
0.31
0.36
0.03
0.48
0.75
not_secreted
extracellular
29-60
0.92
0.00
0.42
0.19
0.01
0.43
0.28
0.13
0.11
0.04
0.10
0.47
secreted
signal_peptide
extracellular
nucleus
RKKR,RKDKRAR,KNRRKRQANAHLKK,RRKRQANAHLKKWSK
1-19
0.97
0.83
0
0.00
0.22
0.17
0.06
0.18
0.17
0.05
0.14
0.01
0.24
0.86
secreted
cytoplasm
1-22
0.66
1.00
0
0.00
0.41
0.07
0.01
0.67
0.37
0.16
0.07
0.07
0.14
0.29
not_secreted
cytoplasm
0.03
0.41
0.15
0.01
0.50
0.42
0.17
0.09
0.13
0.17
0.32
not_secreted
cytoplasm|nucleus
0.00
0.50
0.28
0.01
0.53
0.25
0.03
0.04
0.04
0.11
0.15
secreted
nuclear_localization_signal
cytoplasm
1-24
0.96
1.00
0
0.00
0.49
0.09
0.01
0.63
0.38
0.16
0.06
0.06
0.11
0.38
secreted
signal_peptide
extracellular
1-15
1.00
1.00
0
0.00
0.28
0.32
0.02
0.13
0.08
0.03
0.05
0.02
0.07
0.95
not_secreted
nuclear_localization_signal
nucleus
0.00
0.55
0.30
0.01
0.45
0.06
0.22
0.07
0.01
0.13
0.37
secreted
signal_peptide
extracellular
1-19
0.97
0.53
0
0.00
0.21
0.16
0.06
0.23
0.16
0.07
0.17
0.01
0.30
0.80
not_secreted
extracellular
RRPTTTTPAPRRRTTR,RRRTTRNANLADPKMKCK,RRTTRNANLADPKMKCKYR
4-55
0.81
51-85
0.99
0.00
0.24
0.06
0.37
0.16
0.20
0.08
0.07
0.01
0.17
0.79
membrane_bound
lysosome_vacuole
1-33
1.00
3.00
0.31
0.19
0.01
0.16
0.32
0.59
0.28
0.03
0.32
0.09
membrane_bound
transmembrane_domain
endoplasmic_reticulum
1-20
0.55
2.00
0.14
0.19
0.04
0.20
0.64
0.57
0.24
0.01
0.38
0.11
not_secreted
cytoplasm|nucleus
RRRR
48-74
1.00
31-63
0.98
0.00
0.51
0.49
0.05
0.53
0.06
0.01
0.03
0.17
0.08
0.46
not_secreted
signal_peptide
extracellular
KKGSAHSEAKKQPTKPKAADKGKKV
0.00
0.14
0.08
0.05
0.16
0.35
0.20
0.11
0.02
0.23
0.35
not_secreted
mitochondrion|plastid
LLRRKRSVRGREEKKA
0.00
0.05
0.67
0.96
0.09
0.07
0.01
0.03
0.02
0.12
0.13
not_secreted
cytoplasm
3-41
0.92
20-81
0.93
0.00
0.47
0.51
0.40
0.50
0.34
0.22
0.31
0.15
0.14
0.31
not_secreted
nuclear_localization_signal
cytoplasm
RRRR,RAEKRTK,PPPKRKY,KKEDAEDDEQQKHLKR
30-64
0.98
0.00
0.43
0.20
0.03
0.70
0.10
0.14
0.16
0.10
0.27
0.12
not_secreted
cytoplasm
0.00
0.20
0.11
0.02
0.65
0.19
0.44
0.36
0.02
0.47
0.04
not_secreted
cytoplasm
RRFDLRVDEHFKTRKW
40-65
1.00
0.00
0.48
0.19
0.05
0.48
0.48
0.20
0.28
0.02
0.27
0.32
not_secreted
endoplasmic_reticulum
RRFDFYVDEHFKTRKW
83-106
0.90
0.00
0.37
0.57
0.10
0.41
0.61
0.15
0.16
0.02
0.20
0.21
not_secreted
signal_peptide
endoplasmic_reticulum
23-69
0.99
0.00
0.40
0.29
0.08
0.25
0.61
0.16
0.06
0.01
0.15
0.37
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.56
0.34
0.04
0.51
0.15
0.08
0.08
0.04
0.27
0.28
not_secreted
nuclear_localization_signal
nucleus
KKPR,RRGRKRKS
20-43
0.93
36-76
0.92
0.00
0.92
0.10
0.01
0.31
0.04
0.04
0.03
0.01
0.05
0.08
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RKWTLGKMEIRSKIRRWRL
0.00
0.61
0.22
0.10
0.58
0.13
0.07
0.11
0.01
0.16
0.30
not_secreted
nucleus
78-102
0.98
0.00
0.67
0.19
0.04
0.44
0.08
0.14
0.11
0.03
0.05
0.22
not_secreted
nuclear_localization_signal
nucleus
5-44
0.95
0.00
0.49
0.25
0.03
0.46
0.13
0.07
0.08
0.02
0.27
0.13
not_secreted
cytoplasm
20-61
0.93
0.00
0.38
0.30
0.06
0.50
0.07
0.03
0.03
0.22
0.22
0.14
not_secreted
cytoplasm|nucleus
PKEKRRR,KRLGRTDEKNHSIKRIAK,KEKRRRQQQKLLRPREPRSPR
0.00
0.52
0.29
0.02
0.48
0.07
0.02
0.03
0.15
0.17
0.25
not_secreted
nuclear_localization_signal
nucleus
0.00
0.58
0.26
0.05
0.44
0.10
0.06
0.05
0.04
0.37
0.29
not_secreted
nuclear_localization_signal
nucleus
1-42
0.89
0.00
0.56
0.32
0.05
0.42
0.22
0.06
0.06
0.02
0.25
0.23
not_secreted
nuclear_localization_signal
nucleus
1-42
0.89
0.00
0.53
0.31
0.03
0.42
0.21
0.06
0.07
0.02
0.24
0.24
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.57
0.26
0.05
0.50
0.15
0.11
0.12
0.04
0.27
0.24
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.70
0.50
0.02
0.51
0.08
0.07
0.06
0.03
0.07
0.15
not_secreted
nuclear_localization_signal
nucleus
67-87
0.90
0.00
0.49
0.33
0.05
0.47
0.19
0.05
0.11
0.04
0.32
0.39
not_secreted
mitochondrial_transit_peptide
mitochondrion
RHRR
3-29
0.99
0.00
0.09
0.98
0.01
0.10
0.04
0.01
0.03
0.02
0.03
0.01
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
11-31
0.98
0.00
0.15
0.19
0.01
0.14
0.80
0.26
0.46
0.01
0.17
0.06
not_secreted
nuclear_localization_signal
cytoplasm
KRQK,RKAPLYQGGTRKQMLKRLR,KRLRDHHRKELIEHRKKNH
0.00
0.50
0.19
0.02
0.63
0.08
0.15
0.10
0.02
0.11
0.12
not_secreted
nucleus
0.00
0.48
0.28
0.03
0.38
0.06
0.07
0.08
0.10
0.12
0.14
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.24
0.22
0.01
0.77
0.06
0.16
0.14
0.00
0.20
0.26
not_secreted
nuclear_localization_signal
nucleus
35-58
0.86
0.00
0.55
0.25
0.02
0.40
0.17
0.07
0.07
0.01
0.23
0.25
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.54
0.26
0.03
0.49
0.19
0.06
0.09
0.02
0.20
0.20
not_secreted
nuclear_localization_signal
nucleus
0.00
0.61
0.34
0.03
0.45
0.18
0.08
0.08
0.02
0.29
0.22
not_secreted
endoplasmic_reticulum
0.00
0.31
0.21
0.05
0.15
0.54
0.14
0.29
0.00
0.19
0.04
not_secreted
nuclear_localization_signal
cytoplasm
KRQK,RKAPLYQGGTRKQMLKRLR,KRLRDHHRKELIEHRKKNH
0.00
0.50
0.19
0.02
0.63
0.08
0.15
0.10
0.02
0.11
0.12
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
11-31
0.98
0.00
0.17
0.20
0.02
0.13
0.79
0.25
0.43
0.01
0.17
0.06
not_secreted
mitochondrial_transit_peptide
mitochondrion
0.00
0.16
0.89
0.07
0.43
0.07
0.01
0.02
0.05
0.06
0.06
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum|golgi_apparatus
0.00
0.09
0.08
0.03
0.15
0.78
0.47
0.89
0.01
0.20
0.51
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.63
0.43
0.01
0.59
0.13
0.22
0.14
0.11
0.11
0.12