Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal
nucleus
0.00
0.86
0.39
0.02
0.42
0.19
0.15
0.07
0.19
0.07
0.04
secreted
nuclear_localization_signal
nucleus
nucleus
KKLGIKQNNLKERKRFT,KRIMLKQFDQIYAKLKMK,KKKRETVEKFHKIKEKVKQMGKKFTRKEWHKIERKIAKKLGANKMK
1-20
1.00
1.00
0
0.00
0.84
0.10
0.01
0.37
0.04
0.03
0.02
0.01
0.07
0.15
secreted
nuclear_localization_signal
nucleus
nucleus
KKKK,KREIVEKFHKIKEKVK,KKLGINQKKIYKWKRE,RKHSRKEWEEFRAKIK,KKIGVFENVSKKRKIL,LRKYKAKFGIKPKNKL,KKFTRKEWTKIEIKIAKK,KRIMLKQFDQIYSKLKMK
1-24
0.98
1.00
0
0.00
0.86
0.12
0.01
0.46
0.09
0.02
0.02
0.01
0.09
0.06
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRRR,GEKKRSKRR,KRRSSSHHMILSDKRSRL
0.00
0.75
0.09
0.02
0.63
0.06
0.05
0.03
0.04
0.13
0.02
secreted
extracellular
1-24
1.00
1.00
0
0.00
0.22
0.14
0.02
0.46
0.14
0.12
0.11
0.04
0.18
0.66
secreted
nuclear_export_signal
cytoplasm|nucleus
1-25
1.00
1.00
0
0.00
0.66
0.33
0.09
0.70
0.17
0.05
0.07
0.13
0.10
0.03
secreted
signal_peptide|transmembrane_domain
cell_membrane
nucleus
KRRR,RHRR,RRKRR,RKRRK,RKPSIRKSLITRNRRN
1-22
1.00
1.00
1
0.00
0.21
0.06
0.02
0.21
0.16
0.40
0.31
0.07
0.77
0.22
secreted
nuclear_localization_signal
nucleus
nucleus
KKFGINQNISKGRKH,KRETVEKFHKIKEKVK,KRSLERYKSEFKRKSE,KRKILKQFDQIYVKLKTK,RKIATKLGANQMKIYKWKR,KREFGLIKNRYSDEEKRKI,KFHKIKEKVKQMGKKYSKKEWVKIERKIATK
1-18
0.97
0.99
0
0.00
0.87
0.10
0.01
0.39
0.06
0.02
0.02
0.01
0.06
0.06
not_secreted
cytoplasm|endoplasmic_reticulum
17-38
1.00
0.00
0.36
0.45
0.05
0.48
0.63
0.18
0.32
0.02
0.25
0.51
secreted
nuclear_localization_signal
cytoplasm|nucleus
nucleus
KRIQMWEQLQKMERK,KRENETKFAYTMRKSRKFK
1-22
0.97
1.00
0
0.00
0.67
0.22
0.01
0.49
0.19
0.13
0.13
0.04
0.12
0.07
not_secreted
nuclear_localization_signal
nucleus
0.00
0.86
0.16
0.05
0.46
0.19
0.06
0.06
0.12
0.06
0.05
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.47
0.59
0.03
0.48
0.08
0.02
0.04
0.05
0.14
0.31
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.59
0.10
0.01
0.56
0.07
0.03
0.02
0.01
0.10
0.14
secreted
nuclear_localization_signal
nucleus
nucleus
KKLKINQNVSKERKM,KKMGTNQTKIYKWKKE,KRIMLKQFDQIYAKLKMK,RKIAKKMGTNQTKIYKWKK,KKKRETVEKFHKIKEKVKQMGKKYSKKEWQKIERKIAKKMG
1-18
0.96
0.99
0
0.00
0.88
0.09
0.01
0.43
0.06
0.02
0.01
0.01
0.07
0.11
not_secreted
extracellular
0.00
0.25
0.50
0.04
0.26
0.09
0.05
0.06
0.02
0.19
0.80
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.49
0.52
0.26
0.00
0.49
0.15
0.13
0.05
0.00
0.12
0.40
secreted
nuclear_localization_signal
cytoplasm
nucleus
KKVNATGTPPGTPKGKKD,PKGKKDGNHSPTGSPKGNKKVGS
1-23
1.00
1.00
0
0.00
0.44
0.18
0.02
0.51
0.09
0.13
0.07
0.00
0.40
0.22
not_secreted
signal_peptide
extracellular
26-67
0.97
0.00
0.06
0.16
0.05
0.08
0.36
0.17
0.21
0.07
0.21
0.76
not_secreted
extracellular|mitochondrion
0.00
0.29
0.83
0.01
0.37
0.03
0.04
0.10
0.08
0.11
0.63
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KSGREKGNRKDGRGTESGKRNRKRESGRGTERGTGRGTERGR
0.00
0.60
0.04
0.02
0.61
0.17
0.04
0.06
0.00
0.03
0.25
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
RRVGPDGTVLKWQRLRPK
0.01
0.12
0.03
0.02
0.23
0.22
0.28
0.22
0.03
0.67
0.28
secreted
nuclear_localization_signal
nucleus
1-23
0.94
1.00
0
0.00
0.60
0.27
0.00
0.43
0.16
0.14
0.05
0.00
0.08
0.21
secreted
nuclear_localization_signal
cytoplasm|nucleus
1-23
0.94
1.00
0
0.00
0.52
0.26
0.00
0.49
0.15
0.13
0.05
0.00
0.12
0.40
secreted
nucleus
1-23
0.99
1.00
0
0.00
0.46
0.18
0.01
0.42
0.12
0.29
0.07
0.00
0.37
0.19
secreted
nuclear_localization_signal
cytoplasm|nucleus
1-23
1.00
1.00
0
0.00
0.61
0.21
0.03
0.48
0.10
0.04
0.05
0.01
0.29
0.18
secreted
nucleus
1-23
1.00
1.00
0
0.00
0.55
0.27
0.02
0.39
0.07
0.03
0.03
0.02
0.11
0.24
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
4-74
0.95
0.00
0.79
0.15
0.01
0.52
0.05
0.05
0.06
0.02
0.10
0.05
secreted
signal_peptide
extracellular
nucleus
KRRK,KEAKTEKHRKRNLKKLELSFRQFQRKMVRRKRREIVKRKTFYAKLAKHQKK
1-20
0.96
0.91
0
0.00
0.37
0.25
0.08
0.06
0.14
0.05
0.17
0.27
0.21
0.89
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.60
0.38
0.14
0.52
0.08
0.08
0.09
0.15
0.10
0.37
secreted
nuclear_localization_signal
cytoplasm|nucleus
nucleus
KKQLKIDNSLKNKKI,KREIVKKFHKIREKIR,KKLGENRNKIYKWKKE,KKRNMLSIAEKMEKIKKY,IVKKFHKIREKIRQMGRKYSAKEWEKIERKIAKKLGENRNKIYKWKK
1-21
0.96
0.96
0
0.00
0.81
0.14
0.03
0.56
0.09
0.02
0.05
0.02
0.08
0.08
not_secreted
signal_peptide
extracellular
KRELGERAPKESHRVQKR
0.00
0.06
0.12
0.02
0.09
0.11
0.15
0.15
0.00
0.05
0.93
not_secreted
mitochondrial_transit_peptide
mitochondrion
5-45
0.97
0.00
0.12
0.86
0.00
0.19
0.05
0.04
0.06
0.03
0.03
0.03
not_secreted
signal_peptide
extracellular
KRELGERAPKESHRVQKR
0.00
0.07
0.11
0.02
0.09
0.10
0.14
0.12
0.00
0.05
0.92
secreted
signal_peptide
endoplasmic_reticulum
1-21
0.98
1.00
0
0.00
0.17
0.24
0.09
0.41
0.54
0.21
0.20
0.01
0.23
0.52
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRKL,RKVDPFSNIFSDFKRQIK
0.00
0.59
0.19
0.01
0.50
0.14
0.09
0.12
0.04
0.10
0.29
secreted
extracellular
1-27
1.00
1.00
0
0.00
0.33
0.25
0.08
0.21
0.09
0.08
0.07
0.01
0.30
0.89
secreted
extracellular
1-27
1.00
1.00
0
0.00
0.33
0.25
0.08
0.21
0.09
0.08
0.07
0.01
0.30
0.89
not_secreted
signal_peptide
extracellular
45-75
0.97
0.00
0.18
0.01
0.09
0.05
0.15
0.21
0.11
0.01
0.07
0.91
not_secreted
nuclear_localization_signal
nucleus
0.00
0.70
0.19
0.01
0.41
0.41
0.10
0.15
0.03
0.10
0.09
secreted
extracellular
1-27
1.00
1.00
0
0.00
0.22
0.40
0.03
0.19
0.13
0.23
0.14
0.04
0.15
0.84
secreted
extracellular
1-27
0.99
1.00
0
0.00
0.36
0.17
0.07
0.18
0.07
0.09
0.04
0.01
0.27
0.80
not_secreted
signal_peptide
extracellular
7-28
0.91
0.00
0.20
0.27
0.16
0.37
0.51
0.14
0.20
0.03
0.26
0.55
not_secreted
nuclear_localization_signal
cytoplasm|cell_membrane
0.00
0.23
0.14
0.02
0.67
0.16
0.32
0.24
0.03
0.57
0.07
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum|golgi_apparatus
3-53
0.76
0.00
0.10
0.09
0.00
0.26
0.77
0.48
0.73
0.00
0.18
0.43
secreted
extracellular
nucleus
RKKR
1-20
0.98
1.00
0
0.00
0.24
0.34
0.07
0.21
0.14
0.03
0.09
0.04
0.09
0.84
secreted
signal_peptide
extracellular
nucleus
RKKR,KRESDTIGDELPKVMKK
1-20
0.99
1.00
0
0.00
0.25
0.29
0.03
0.22
0.23
0.05
0.15
0.04
0.09
0.91
secreted
nuclear_localization_signal
nucleus
nucleus
KRRK,KRKYSTYSKEEKLKKL
1-19
0.98
0.90
0
0.00
0.82
0.09
0.01
0.39
0.06
0.03
0.05
0.02
0.06
0.01
not_secreted
signal_peptide
extracellular
KRSMTLGRLSFRPGKR,KRTAALGRVGFRPGKR,KRSIATGRVGFRPGKR,KRWSFPVSGAYAHDRQNRR,GFRPGKRSMAVGRTGFRPGKRSIATGRVGFRPGK
55-75
0.99
0.00
0.05
0.10
0.07
0.11
0.10
0.09
0.19
0.01
0.19
0.86
secreted
extracellular
mitochondria
KRSMTLGRLSFRPGKR,KRTAALGRVGFRPGKR,KRSMAVGRTGFRPGKR,KRWSFPVSGAYAHDRQNRR
39-60
0.99
0.52
0.13
0
0.22
0.26
0.23
0.11
0.05
0.01
0.02
0.01
0.08
0.86
secreted
nuclear_localization_signal
nucleus
1-19
0.99
1.00
0
0.00
0.86
0.11
0.01
0.32
0.04
0.03
0.03
0.02
0.05
0.02