Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
transmembrane_domain
cell_membrane
8-34
0.97
0.00
0.14
0.08
0.01
0.09
0.26
0.17
0.18
0.03
0.80
0.05
secreted
extracellular
1-23
0.97
0.99
0
0.00
0.31
0.24
0.05
0.30
0.09
0.04
0.04
0.02
0.15
0.93
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
0.00
0.10
0.07
0.01
0.11
0.48
0.45
0.33
0.05
0.63
0.05
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRSECGTYELRLKNK
0.00
0.76
0.05
0.02
0.57
0.03
0.02
0.03
0.01
0.13
0.04
not_secreted
cytoplasm
12-32
1.00
0.00
0.42
0.45
0.02
0.51
0.20
0.25
0.18
0.23
0.09
0.12
secreted
cell_membrane
1-17
0.97
1.00
0
0.00
0.04
0.05
0.02
0.11
0.11
0.21
0.21
0.12
0.79
0.48
secreted
signal_peptide
extracellular
1-17
0.99
1.00
0
0.00
0.22
0.29
0.14
0.20
0.26
0.27
0.21
0.01
0.37
0.78
secreted
nuclear_localization_signal
cytoplasm|nucleus
mitochondria
IKKDRKMKMRHKRG
31-67
0.92
1-22
0.97
1.00
0
0.00
0.63
0.14
0.01
0.62
0.25
0.14
0.17
0.06
0.10
0.01
secreted
nuclear_localization_signal
cytoplasm|nucleus
nucleus
LRRSKTKKETRKEKEESSSAGSSSRSKTKKDDTTKEKGKN
1-24
0.99
1.00
0
0.00
0.63
0.09
0.01
0.57
0.11
0.17
0.12
0.04
0.15
0.05
not_secreted
nuclear_localization_signal
nucleus
0.00
0.73
0.15
0.01
0.39
0.08
0.07
0.04
0.03
0.06
0.08
not_secreted
signal_peptide
extracellular
0.00
0.11
0.23
0.08
0.10
0.13
0.11
0.10
0.01
0.28
0.86
secreted
nuclear_localization_signal
cytoplasm
nucleus
RTKSNKAKKDDRTTKLMKKSGKEKKEK
1-28
0.99
1.00
0
0.00
0.47
0.07
0.00
0.67
0.09
0.07
0.07
0.01
0.21
0.27
secreted
nuclear_localization_signal
cytoplasm
nucleus
KKKKKSIKGRN,KKPSGTTNKETKTVKK,KKSNTTKTMSRSKSNKAKK
1-34
0.84
1.00
0
0.00
0.39
0.15
0.00
0.74
0.15
0.30
0.30
0.05
0.16
0.04
secreted
signal_peptide|transmembrane_domain
cell_membrane
nucleus
KKHHQKR,RRRCFLFKAFLRHNKK
1-14
0.93
1.00
1
0.00
0.17
0.06
0.02
0.25
0.18
0.42
0.25
0.08
0.75
0.11
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.62
0.18
0.00
0.54
0.17
0.14
0.07
0.01
0.10
0.15
secreted
extracellular
1-23
1.00
1.00
0
0.00
0.25
0.56
0.04
0.15
0.10
0.09
0.09
0.07
0.15
0.94
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KKITPEQSGPSKKTLR,PSKKTLRQKQKRKNKSMRKKQPKKMF
24-61
0.89
0.00
0.79
0.13
0.01
0.63
0.19
0.04
0.06
0.01
0.05
0.10
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.70
0.17
0.13
0.51
0.20
0.04
0.07
0.02
0.12
0.12
not_secreted
nuclear_localization_signal
nucleus
KRRR,RPPRRRRRHGR,RRKQQRRSKRRCRQR,RRSKRRCRQRLERQRLR
13-61
0.97
0.00
0.85
0.09
0.00
0.40
0.07
0.03
0.07
0.02
0.06
0.10
not_secreted
nuclear_localization_signal
nucleus
KRRR,RRRHLRRSP
13-61
0.97
0.00
0.87
0.07
0.01
0.36
0.05
0.02
0.05
0.03
0.06
0.12
not_secreted
nuclear_localization_signal
nucleus
0.00
0.76
0.31
0.01
0.30
0.07
0.09
0.08
0.03
0.08
0.19
not_secreted
cytoplasm
0.00
0.41
0.30
0.05
0.42
0.31
0.20
0.11
0.04
0.07
0.17
not_secreted
cytoplasm
RRVKRAAAPTPRAR
77-113
0.91
68-91
1.00
0.00
0.44
0.11
0.03
0.66
0.19
0.14
0.20
0.06
0.13
0.19
not_secreted
cytoplasm
0.00
0.49
0.56
0.03
0.51
0.07
0.03
0.03
0.03
0.12
0.21
not_secreted
nucleus
0.00
0.59
0.51
0.02
0.44
0.09
0.06
0.03
0.02
0.07
0.05
not_secreted
nuclear_localization_signal
nucleus
RRTGRGEKVRGEKAGGENTSRRKTRGKLAAAKLPRRNGRGEPTPTQKLVRPPPSIRIPKGKTPKKVRPRRP
29-50
0.97
0.00
0.74
0.14
0.05
0.31
0.03
0.04
0.03
0.01
0.05
0.15
not_secreted
nucleus|extracellular
0.00
0.50
0.18
0.03
0.32
0.15
0.05
0.04
0.03
0.16
0.80
not_secreted
nuclear_localization_signal
nucleus
KKSSAISREALLKLKRT,KRLVINQLETPEEEAKRKQ
0.00
0.72
0.15
0.01
0.38
0.06
0.03
0.03
0.01
0.10
0.13
not_secreted
nuclear_export_signal
nucleus
0.00
0.66
0.22
0.03
0.43
0.27
0.18
0.15
0.09
0.06
0.06
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RGRPRDPRRP,RRLGEWRGRPRDPRR
72-96
0.85
38-67
0.98
0.00
0.55
0.12
0.01
0.63
0.07
0.02
0.05
0.00
0.10
0.21
not_secreted
cytoplasm|nucleus
18-58
0.87
0.00
0.69
0.38
0.02
0.50
0.16
0.07
0.13
0.24
0.10
0.19
not_secreted
nuclear_localization_signal
nucleus
0.00
0.87
0.15
0.01
0.26
0.02
0.02
0.01
0.00
0.05
0.26
not_secreted
nuclear_localization_signal
nucleus
0.00
0.86
0.17
0.01
0.27
0.02
0.03
0.01
0.00
0.04
0.31
membrane_bound
cell_membrane
1-17
1.00
1.00
1
1.00
0.15
0.06
0.02
0.25
0.18
0.34
0.33
0.15
0.56
0.48
not_secreted
nuclear_localization_signal
nucleus
KKRP,KRPR,RRRR,QKRKK
0.00
0.90
0.09
0.01
0.24
0.04
0.02
0.05
0.02
0.03
0.24
not_secreted
nuclear_localization_signal
nucleus
0.00
0.56
0.18
0.07
0.44
0.08
0.10
0.10
0.02
0.10
0.18
not_secreted
nuclear_localization_signal
nucleus
KRRP,RKSK,RRLHWAVAENKKEIRQLRK
0.00
0.78
0.11
0.01
0.36
0.04
0.11
0.03
0.01
0.05
0.15
not_secreted
nucleus
0.00
0.75
0.28
0.01
0.27
0.12
0.06
0.02
0.05
0.13
0.56
secreted
nuclear_localization_signal
cytoplasm|nucleus
nucleus
KKEGKKGAVASPAKGKASPKGASPAKGKAAKGGKKDAKKAGKKDGKGKKDKKEKPVKKAGKGKNAAKKDKTKNKKAPAAAKPK
1-23
0.99
1.00
0
0.00
0.73
0.01
0.00
0.54
0.04
0.06
0.22
0.00
0.11
0.04
not_secreted
cytoplasm
RKNSLAPPEPSRVRRRSI
0.00
0.25
0.20
0.02
0.64
0.18
0.33
0.34
0.00
0.44
0.24
not_secreted
extracellular|mitochondrion
0.00
0.48
0.63
0.01
0.42
0.13
0.04
0.13
0.11
0.05
0.62
not_secreted
cytoplasm
0.00
0.43
0.57
0.01
0.57
0.13
0.10
0.10
0.21
0.18
0.19
not_secreted
extracellular
0.00
0.14
0.24
0.04
0.34
0.27
0.25
0.37
0.01
0.32
0.69
not_secreted
cell_membrane
PLLKRRM
0.00
0.14
0.26
0.01
0.14
0.14
0.16
0.27
0.03
0.29
0.04
not_secreted
cytoplasm|nucleus|extracellular
PLLKRRL
0.00
0.51
0.34
0.01
0.57
0.11
0.05
0.13
0.10
0.16
0.71
not_secreted
extracellular
0.00
0.13
0.23
0.05
0.27
0.29
0.26
0.38
0.02
0.39
0.71
not_secreted
transmembrane_domain
cell_membrane
PLLKRRM
0.00
0.18
0.08
0.03
0.11
0.35
0.17
0.24
0.04
0.67
0.03
not_secreted
transmembrane_domain
cell_membrane
21-61
0.93
0.00
0.22
0.05
0.04
0.06
0.31
0.24
0.21
0.03
0.74
0.03
not_secreted
nuclear_localization_signal
cytoplasm
RRRK,KKRMKHGRRK,RRTFLELAAKKERRHRS
0.00
0.31
0.11
0.02
0.76
0.05
0.07
0.11
0.18
0.47
0.06
not_secreted
transmembrane_domain
cell_membrane
PLLKRRF,KRRFLMLLKTIFRLKRN
0.00
0.15
0.15
0.02
0.13
0.27
0.11
0.13
0.06
0.73
0.03