Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
transmembrane_domain
cell_membrane
PLLKRRF
0.00
0.17
0.10
0.02
0.10
0.30
0.14
0.20
0.04
0.70
0.04
not_secreted
transmembrane_domain
cell_membrane
0.00
0.12
0.12
0.03
0.10
0.27
0.25
0.27
0.07
0.59
0.04
membrane_bound
cell_membrane
1-17
1.00
1.00
1
1.00
0.05
0.11
0.01
0.13
0.14
0.11
0.14
0.04
0.79
0.50
not_secreted
nuclear_export_signal
nucleus
0.13
0.68
0.16
0.12
0.40
0.09
0.15
0.11
0.07
0.25
0.18
not_secreted
nucleus
0.00
0.50
0.24
0.02
0.35
0.05
0.04
0.09
0.31
0.19
0.43
not_secreted
nuclear_localization_signal
nucleus
5-27
0.91
0.02
0.56
0.18
0.02
0.45
0.14
0.03
0.07
0.03
0.06
0.37
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RKKQIADLKKKMKTK
0.00
0.64
0.17
0.01
0.59
0.09
0.04
0.09
0.02
0.09
0.31
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.46
0.16
0.22
0.55
0.32
0.03
0.23
0.03
0.15
0.24
not_secreted
nuclear_localization_signal
nucleus
RKRK
0.00
0.89
0.11
0.04
0.39
0.11
0.02
0.04
0.04
0.06
0.02
not_secreted
nuclear_localization_signal
nucleus
KRKL,KKANQINNEKKQKRI,KKWKCDKIEEKFKEKCK,KKDNPKKANQINNEKKQKR
0.00
0.76
0.28
0.01
0.47
0.11
0.06
0.05
0.01
0.24
0.16
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RKRK
56-80
0.97
61-81
1.00
0.00
0.67
0.26
0.05
0.51
0.10
0.09
0.07
0.02
0.11
0.12
not_secreted
nucleus
KRSVTELFLNIKMKKKSRE
24-83
0.84
0.00
0.52
0.25
0.02
0.40
0.29
0.06
0.10
0.03
0.11
0.16
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRKR,RKGLEGMYLDAHFDRKLSK
0.00
0.52
0.21
0.01
0.63
0.09
0.05
0.04
0.05
0.11
0.05
not_secreted
endoplasmic_reticulum
PKSSNRRKKK
19-51
0.99
1-25
1.00
0.00
0.35
0.22
0.13
0.32
0.49
0.14
0.36
0.05
0.08
0.16
not_secreted
nuclear_localization_signal
nucleus
0.00
0.56
0.36
0.03
0.45
0.14
0.05
0.02
0.00
0.08
0.11
not_secreted
nuclear_localization_signal
cytoplasm
KKDEIEVEMKKKRTVR,RRSLTINRTCPKCRRP,KKKRTVRTSQTATRRRQL,RRILSEKKDEIEVEMKKKR
0.01
0.45
0.30
0.01
0.66
0.06
0.13
0.17
0.05
0.20
0.09
not_secreted
nuclear_localization_signal
cytoplasm
KKDEIEVEMKKKRTVR,RRSLTINRTCPKCRRP,KKKRTVRTSQTATRRRQL,RRILSEKKDEIEVEMKKKR
0.00
0.45
0.23
0.02
0.69
0.07
0.17
0.21
0.05
0.21
0.07
not_secreted
nuclear_localization_signal
nucleus
KKRP,RYDKRNR
0.00
0.73
0.20
0.04
0.41
0.12
0.05
0.06
0.01
0.11
0.07
not_secreted
nucleus
KRDRVVSLTKVKKKSRQ
102-122
1.00
0.00
0.45
0.11
0.03
0.34
0.11
0.18
0.06
0.01
0.10
0.06
not_secreted
nucleus
SAPKNKAQLKKAKK
23-51
1.00
8-45
1.00
0.00
0.55
0.42
0.06
0.38
0.09
0.04
0.05
0.01
0.14
0.34
secreted
nuclear_localization_signal
cytoplasm|nucleus
1-23
0.99
1.00
0
0.00
0.79
0.34
0.00
0.56
0.05
0.02
0.03
0.01
0.11
0.32
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRDIDHANLCHFTVFRRGK,KKKHETKKRNERKTKKKLLDRAEKAEKEAIEKKRKE
0.00
0.54
0.18
0.01
0.69
0.24
0.19
0.18
0.01
0.13
0.16
not_secreted
nuclear_localization_signal
cytoplasm
AKKTK
33-54
0.94
0.00
0.47
0.21
0.01
0.52
0.12
0.05
0.07
0.01
0.25
0.22
not_secreted
transmembrane_domain
cell_membrane
PLLKRRF
0.00
0.17
0.09
0.03
0.10
0.31
0.14
0.21
0.04
0.71
0.03
not_secreted
nuclear_localization_signal
nucleus
KKDNILAKCESFSMKRRVP
38-58
0.99
19-51
0.98
0.00
0.75
0.10
0.01
0.45
0.03
0.03
0.04
0.01
0.09
0.02
not_secreted
transmembrane_domain
cell_membrane
PLLKRRF
0.00
0.17
0.10
0.03
0.10
0.31
0.14
0.20
0.04
0.70
0.03
not_secreted
transmembrane_domain
cell_membrane
PLLKRRF,KRRFLMLLKTIFRLKRN
39-129
0.93
0.00
0.22
0.12
0.03
0.07
0.24
0.28
0.29
0.08
0.56
0.03
not_secreted
extracellular
0.00
0.12
0.22
0.04
0.31
0.23
0.27
0.38
0.01
0.30
0.76
membrane_bound
signal_peptide|transmembrane_domain
lysosome_vacuole
1-17
1.00
1.00
1
1.00
0.16
0.07
0.07
0.31
0.31
0.52
0.33
0.05
0.42
0.45
secreted
nuclear_localization_signal
nucleus
nucleus
RKDEEKLLIIKKFIK,KLKIKIYKNKSKKKF
1-18
0.96
1.00
0
0.00
0.97
0.06
0.00
0.20
0.01
0.01
0.01
0.01
0.02
0.11
not_secreted
nuclear_localization_signal
nucleus
0.00
0.77
0.15
0.04
0.38
0.10
0.07
0.08
0.04
0.08
0.03
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
KGARGHAGQPGKSGKH
17-56
0.89
0.08
0.05
0.11
0.01
0.14
0.52
0.14
0.28
0.01
0.59
0.20
not_secreted
cytoplasm
10-60
0.99
0.00
0.38
0.29
0.07
0.43
0.05
0.09
0.11
0.11
0.04
0.41
not_secreted
nuclear_localization_signal
nucleus
RRNNKNNDSNGMKARLK,KARLKSWAKRAKNERRGALKELRKGAKGMANAYAERQRKVRRERGEKTKR
0.00
0.81
0.11
0.02
0.28
0.07
0.02
0.04
0.00
0.04
0.09
not_secreted
nucleus
18-39
0.99
9-32
0.97
0.00
0.61
0.21
0.02
0.32
0.03
0.09
0.02
0.01
0.07
0.29
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRDIDHANLCHFTVFRRGK,KKKHETKKRNERKTKKKLLDRAEKAEKEAIEKKRKE
0.00
0.54
0.19
0.01
0.70
0.25
0.19
0.18
0.01
0.13
0.15
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KKRP,PKPS,KKPIPGRNWDEDRRKRNE,RRNLEGMHLDAHFDRKLSK
28-48
0.94
0.00
0.66
0.15
0.04
0.49
0.18
0.07
0.06
0.03
0.17
0.07
not_secreted
nuclear_localization_signal
nucleus
RRNKQCQCQRGPAVKEKPR,VKEKPRSGAAKRRAKERSAA
17-55
0.95
0.00
0.90
0.10
0.01
0.40
0.02
0.01
0.02
0.01
0.03
0.05
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.43
0.23
0.05
0.47
0.09
0.12
0.14
0.05
0.08
0.41
not_secreted
signal_peptide
extracellular
LGEV
32-52
1.00
0.00
0.16
0.10
0.03
0.39
0.27
0.40
0.41
0.02
0.39
0.49
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.61
0.16
0.03
0.57
0.15
0.20
0.06
0.01
0.15
0.14
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.52
0.41
0.01
0.49
0.14
0.07
0.08
0.04
0.20
0.25
not_secreted
cytoplasm
RRCIVLLGANGVGRRTLKR
0.00
0.26
0.42
0.04
0.57
0.25
0.30
0.19
0.03
0.39
0.11
not_secreted
cytoplasm|nucleus
3-32
0.99
0.17
0.53
0.22
0.02
0.54
0.07
0.01
0.02
0.04
0.19
0.40
not_secreted
signal_peptide
endoplasmic_reticulum
RKNQNVPRHSSRRHKRE
0.00
0.36
0.22
0.00
0.25
0.52
0.32
0.20
0.03
0.23
0.15
not_secreted
nuclear_localization_signal
nucleus
KKELLHRLPKEKLRQK,HRLPKEKLRQKVPAQQKEKLQRVAKKMQKKRAKKDGKVKKEKKEKPAKKAGKGKDAAKKDKTKDKKVPAAAKPK
0.00
0.80
0.10
0.01
0.36
0.06
0.05
0.10
0.00
0.06
0.12
not_secreted
nuclear_localization_signal
nucleus
KKELLHRLPKEKLRQK,HRLPKEKLRQKVPAQQKEKLQRVAKKMQKKRAKKDGKVKKEKKEKPAKKAGKGKDAAKKDKTKDKKVPAAAKPK
0.00
0.80
0.10
0.01
0.36
0.06
0.05
0.10
0.00
0.06
0.12
not_secreted
nuclear_localization_signal
nucleus
0.00
0.76
0.19
0.01
0.45
0.09
0.04
0.04
0.02
0.15
0.16
not_secreted
nuclear_localization_signal
nucleus
KRRR,RHRR,GKRVAKNPKKG,RRNFPPLAIPPLPKKDHK
0.00
0.84
0.09
0.01
0.34
0.02
0.03
0.05
0.01
0.05
0.09
not_secreted
cytoplasm
0.00
0.49
0.57
0.02
0.59
0.07
0.14
0.06
0.06
0.10
0.28