Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
29-50
0.91
1-40
0.98
0.00
0.55
0.34
0.03
0.56
0.13
0.08
0.12
0.02
0.27
0.20
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.72
0.20
0.04
0.59
0.33
0.15
0.09
0.03
0.17
0.14
not_secreted
nuclear_localization_signal
nucleus
25-53
1.00
0.00
0.55
0.39
0.03
0.33
0.07
0.02
0.05
0.02
0.09
0.33
not_secreted
nuclear_localization_signal
nucleus
KPRTNSAKGPVVAQRGHRSNGRRPKYKKWSMLSRAVPAKEKKTNDQPKTRKVDKRRTKRKKWRTMKHWATAKTLLILKMRRRRTEKRR
0.00
0.87
0.25
0.03
0.16
0.04
0.03
0.03
0.02
0.14
0.16
not_secreted
nuclear_localization_signal
nucleus
KPRTNSAKGPVVAQRGHRSNGRRPKYKKWSMLSRAVPAKEKKTNDQPKTRKVDKRRTKRKKWRTMKHWATAKTLLILKMRRRRTEKRR
0.00
0.86
0.19
0.02
0.18
0.04
0.02
0.03
0.01
0.08
0.11
not_secreted
cytoplasm
23-43
1.00
12-97
0.99
0.00
0.32
0.46
0.03
0.48
0.14
0.08
0.15
0.03
0.20
0.45
not_secreted
endoplasmic_reticulum
KKRRRPHKK,RRFDFYVDEHFKTRKWKL
28-70
0.86
0.00
0.42
0.39
0.09
0.38
0.57
0.18
0.26
0.01
0.15
0.18
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
5-25
1.00
0.00
0.51
0.32
0.00
0.52
0.08
0.08
0.07
0.01
0.14
0.28
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
QPGQPSHKRHKRGKNVAGSERRRRRIAR
13-62
0.96
0.00
0.88
0.07
0.01
0.48
0.04
0.02
0.02
0.00
0.06
0.06
not_secreted
signal_peptide
endoplasmic_reticulum
TSGGRGGAGQKLGGERNAGAGRGGGKGNGRGGGSGGRGGR
0.00
0.20
0.08
0.02
0.16
0.59
0.26
0.25
0.01
0.17
0.50
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRMRQIVEYWKQKCR
0.00
0.69
0.20
0.02
0.51
0.02
0.03
0.03
0.04
0.07
0.10
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.49
0.03
0.01
0.51
0.03
0.07
0.03
0.00
0.03
0.06
not_secreted
nuclear_localization_signal
nucleus
KRRK
0.00
0.85
0.15
0.03
0.36
0.17
0.03
0.03
0.26
0.07
0.45
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RKCKRRV
10-86
0.91
0.00
0.62
0.37
0.05
0.49
0.14
0.04
0.07
0.02
0.23
0.34
not_secreted
nuclear_localization_signal
nucleus
RLCKRRF,KRRFGWAGNLTKHFKTKHR
0.00
0.75
0.19
0.16
0.27
0.03
0.04
0.02
0.00
0.05
0.12
not_secreted
cytoplasm
0.00
0.48
0.29
0.02
0.65
0.24
0.13
0.05
0.08
0.11
0.53
secreted
cytoplasm
1-24
0.84
1.00
0
0.00
0.46
0.06
0.01
0.63
0.42
0.15
0.06
0.04
0.10
0.28
secreted
cytoplasm
1-24
0.84
1.00
0
0.00
0.42
0.07
0.01
0.64
0.38
0.18
0.07
0.05
0.14
0.36
not_secreted
endoplasmic_reticulum
105-125
0.99
24-58
0.96
0.00
0.34
0.40
0.10
0.41
0.43
0.07
0.13
0.01
0.14
0.16
not_secreted
nuclear_localization_signal
nucleus
0.00
0.64
0.33
0.12
0.37
0.15
0.14
0.10
0.11
0.06
0.15
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.70
0.31
0.06
0.49
0.10
0.06
0.04
0.05
0.22
0.24
not_secreted
nucleus
0.00
0.69
0.51
0.03
0.17
0.01
0.04
0.01
0.14
0.14
0.05
not_secreted
nuclear_localization_signal
nucleus
38-79
0.99
45-81
0.99
0.00
0.72
0.33
0.01
0.47
0.06
0.10
0.04
0.05
0.13
0.28
not_secreted
nucleus
RMKKKRIKASKSRLTA
0.00
0.51
0.40
0.04
0.40
0.10
0.04
0.06
0.01
0.10
0.22
not_secreted
nuclear_localization_signal
cytoplasm
KRICTVLRLTVDEQKRKLN
4-24
0.99
0.00
0.37
0.16
0.06
0.59
0.10
0.12
0.08
0.02
0.15
0.13
secreted
extracellular
nucleus
RKKR,RKLLLCYQSEMAKNKKISK
1-19
0.99
1.00
0
0.00
0.31
0.23
0.07
0.29
0.21
0.11
0.11
0.06
0.36
0.54
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.59
0.26
0.12
0.64
0.15
0.07
0.11
0.16
0.17
0.26
not_secreted
nuclear_localization_signal
nucleus
RKRKRSGSKQR
0.00
0.87
0.19
0.01
0.30
0.06
0.04
0.03
0.06
0.05
0.13
not_secreted
endoplasmic_reticulum
KRRR,RRFNCIVDEHFKTRKWKL
20-42
0.92
0.00
0.41
0.40
0.04
0.28
0.63
0.20
0.25
0.03
0.13
0.18
secreted
signal_peptide
extracellular
nucleus
FKVK,RKDKRAR,STKKRRKR,KKFIVCHVIQKRTRA
1-19
0.97
1.00
0
0.00
0.21
0.27
0.04
0.16
0.12
0.07
0.16
0.03
0.20
0.89
not_secreted
signal_peptide
endoplasmic_reticulum
KRRP
23-46
0.98
0.00
0.42
0.16
0.03
0.36
0.76
0.19
0.26
0.02
0.23
0.15
not_secreted
endoplasmic_reticulum
KKRRRPHKK,RRFNCIVDEHFKTRKWKL
22-45
0.83
0.00
0.42
0.43
0.10
0.34
0.54
0.19
0.24
0.03
0.13
0.29
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.59
0.27
0.04
0.48
0.25
0.09
0.14
0.03
0.33
0.18
not_secreted
signal_peptide
endoplasmic_reticulum
RRFDFYVDEHFKTRKWKL
0.00
0.39
0.28
0.04
0.42
0.74
0.17
0.23
0.01
0.29
0.17
not_secreted
signal_peptide
endoplasmic_reticulum
RRFNCIVDEHFKTRKWKL
0.00
0.39
0.33
0.09
0.41
0.58
0.18
0.23
0.02
0.19
0.29
not_secreted
nucleus
0.00
0.80
0.54
0.05
0.43
0.08
0.01
0.02
0.02
0.05
0.07
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
33-84
0.99
48-88
1.00
0.00
0.54
0.21
0.34
0.50
0.20
0.08
0.08
0.07
0.26
0.19
not_secreted
nuclear_localization_signal
nucleus
RKMCRKNIVKKGKKKQK.,IRKMCRKNIVKKGKKKQK,KKLIRKMCRKNIVKKGKKK
0.00
0.95
0.15
0.02
0.14
0.03
0.02
0.03
0.01
0.03
0.05
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
0.00
0.22
0.41
0.03
0.12
0.67
0.31
0.37
0.07
0.13
0.09
not_secreted
nucleus
KRKR,RKRR,KNRRAKERKKTRDVKIK
44-81
0.99
0.00
0.76
0.19
0.01
0.33
0.06
0.04
0.09
0.07
0.03
0.06
not_secreted
nuclear_localization_signal
cytoplasm
KRNRKRDRRGTERRRGT,RKRKRNKKRNRKRNRRG,RKWKRNRKRDRRGTERRRG,KRNRKRKRNKKRNRKRNRR,KRNRKRNRKGKRNRKIKWK,RKRNRKGKRNRKIKWKRNR,KRNRKGKRNRKIKWKRNRK,RKGKRNRKIKWKRNRKWKR,KRNRKIKWKRNRKWKRKWK,RKIKWKRNRKWKRKWKRNR,KRNRKWKRKWKRNRKWKRN,RKWKRKWKRNRKWKRNRKW,KRKWKRNRKWKRNRKWKRN,RKWKRNRKWKRNRKWKRNR,KRNRKWKRNRKWKRNRKRD,RKWKRNRKWKRNRKRDRRG,KRNRKRDRRGTERGRGTKR,GQKRNRKRNRKGKRKRNKKRNRKRNRRGTERGTERGRG
0.00
0.41
0.01
0.03
0.50
0.06
0.02
0.02
0.00
0.16
0.12
not_secreted
nuclear_localization_signal
cytoplasm
KRNRKRNRKGRGRETKR,KRNRKRDRRGTERRRGT,RKRNRRGTERGTERGRGR,RRGTERGTERGRGRETKR,KRGTEKEIEEEQKEEEKKR,KKRNRKWNRKGKRNRKWKR,KRNRKWNRKGKRNRKWKRN,RKWNRKGKRNRKWKRNRKR,KKRNRKRNRKGKRNRKWKR,KRNRKRNRKGKRNRKWKRN,RKRNRKGKRNRKWKRNRKR,KRNRKGKRNRKWKRNRKRD,RKGKRNRKWKRNRKRDRRG,RKWKRNRKRDRRGTERRRG,KRNRKRNRKGKRNRKIKWK,RKRNRKGKRNRKIKWKRNR,KRNRKGKRNRKIKWKRNRK,RKGKRNRKIKWKRNRKWKR,KRNRKIKWKRNRKWKRKWK,RKIKWKRNRKWKRKWKRNR,KRNRKWKRKWKRNRKWKRN,RKWKRKWKRNRKWKRNRKW,KRKWKRNRKWKRNRKWKRN,RKWKRNRKWKRNRKWKRNR,KRNRKWKRNRKWKRNRKRD,RKWKRNRKWKRNRKRDRRG,KRNRKRDRRGTERGRGTKR,KRNRKRNRKGKRKRNKKRN,RKRNRKGKRKRNKKRNRKR,KRNRKGKRKRNKKRNRKRN,RKGKRKRNKKRNRKRNRRG,GQKRNRKRKRNKKRNRKRNRRGTE
0.00
0.41
0.01
0.02
0.61
0.06
0.02
0.03
0.00
0.10
0.12
not_secreted
nuclear_localization_signal
cytoplasm
KRKRNRKGRGTEERNRRG,QKRNRKRKRNKKRNRKRNRRGTESGRG
0.00
0.42
0.04
0.02
0.62
0.08
0.01
0.02
0.00
0.05
0.15
not_secreted
extracellular
0.00
0.14
0.47
0.04
0.43
0.19
0.16
0.24
0.11
0.17
0.52
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
22-43
1.00
0.00
0.13
0.06
0.01
0.09
0.37
0.08
0.09
0.04
0.83
0.09
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
24-44
0.96
0.00
0.13
0.07
0.01
0.10
0.40
0.08
0.10
0.05
0.81
0.08
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.51
0.24
0.04
0.48
0.13
0.08
0.07
0.03
0.26
0.31
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.53
0.33
0.05
0.49
0.11
0.06
0.08
0.02
0.31
0.32
not_secreted
mitochondrion
0.00
0.21
0.54
0.06
0.27
0.25
0.10
0.17
0.04
0.27
0.09
secreted
nuclear_localization_signal
cytoplasm|nucleus
nucleus
KKVTIAKTAQVKDKKS,KKDNKKAAVAASPAKGKASPKGGKSPAKGKAAKKLKPKKDAKGIKAKKAKPAKKGKAAKVVKGTPKTVKKVTIAK
1-23
0.98
1.00
0
0.00
0.58
0.04
0.02
0.54
0.08
0.09
0.22
0.00
0.21
0.10