Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRMDLKLGSQLGKQIRR,GRRRLGKTEKGRRHAGEAVLRR
74-103
0.97
0.00
0.69
0.17
0.10
0.52
0.08
0.10
0.20
0.09
0.14
0.15
not_secreted
nuclear_localization_signal
nucleus
KIRSRGRGAK,KKVLFVDASKNRKRRSQ
0.00
0.94
0.04
0.01
0.20
0.04
0.02
0.06
0.01
0.02
0.07
not_secreted
nucleus
KRRYVNVAAAGPGRRRGP,HGSLARAGKVRAQTPKVEKQEKKKKKRGRAFRRIQYKRRYVNVAAAGPGRRRG
0.00
0.64
0.07
0.05
0.47
0.22
0.05
0.04
0.00
0.05
0.09
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.50
0.27
0.00
0.54
0.28
0.26
0.33
0.19
0.08
0.02
not_secreted
nuclear_localization_signal
nucleus
KKRK,KRKL,KRKR,RKRR,RRRSNSPENAWERKDHR,RRSSRSPPRRHRRRTTR,RRRTTRSRERERRRRSSR,RRHRRRTTRSRERERRRRS,REKKRREEQLLEESRLLRKREREKRKTDDGREKERRESEAHSSAGRRRRRSSSEK
0.00
0.91
0.05
0.01
0.14
0.04
0.01
0.04
0.02
0.05
0.05
not_secreted
nucleus
6-28
1.00
0.00
0.44
0.38
0.35
0.28
0.12
0.04
0.02
0.14
0.11
0.34
not_secreted
mitochondrial_transit_peptide
mitochondrion
RPKKIRR,KRAIIYTSCRKEGFKNTKK
1-21
0.94
8-33
0.96
0.00
0.11
0.94
0.05
0.11
0.02
0.01
0.03
0.01
0.05
0.02
not_secreted
nuclear_export_signal
cytoplasm
RKGTDEVYAVKVLKK,RKVKPPFKPRIRSKRD
0.00
0.44
0.15
0.01
0.64
0.12
0.43
0.25
0.02
0.47
0.03
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.35
0.15
0.01
0.55
0.15
0.31
0.54
0.03
0.16
0.07
not_secreted
nuclear_localization_signal
nucleus
PKRRKGRPPNKKA,RREHGFNSPRRRHGKCRRH
0.00
0.98
0.05
0.05
0.18
0.03
0.01
0.01
0.01
0.04
0.04
not_secreted
cytoplasm
KRIR,PKPS
0.00
0.42
0.23
0.02
0.49
0.22
0.52
0.38
0.08
0.10
0.09
not_secreted
nuclear_localization_signal
nucleus
RKRK,RKSEVNEKEQKKGER,KGQRRAKEREDKEEKKP,KRPAEREQNDDQQQKGQRR
0.00
0.89
0.10
0.03
0.31
0.05
0.02
0.05
0.01
0.03
0.08
not_secreted
nuclear_localization_signal
nucleus
RKRK,RKSEVNEKEQKKGER,KGQRRAKEREDKEEKKP,KRPAEREQNDDQQQKGQRR
0.00
0.86
0.12
0.04
0.37
0.06
0.03
0.06
0.02
0.05
0.08
not_secreted
cytoplasm
20-40
1.00
0.00
0.38
0.25
0.02
0.44
0.34
0.05
0.22
0.08
0.21
0.36
not_secreted
mitochondrial_transit_peptide
mitochondrion
RKQPKLLASEMWQRIKDR
0.00
0.06
0.92
0.04
0.14
0.06
0.03
0.05
0.02
0.04
0.02
not_secreted
mitochondrial_transit_peptide
mitochondrion
33-55
0.97
0.00
0.31
0.94
0.02
0.15
0.01
0.01
0.01
0.02
0.05
0.03
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
12-32
1.00
42-100
0.79
0.00
0.65
0.25
0.00
0.63
0.11
0.02
0.04
0.03
0.07
0.10
secreted
nuclear_localization_signal
nucleus
chloroplast
RWDKRYK,RRIPKMSRTEKRKLL,KRHRATAQSDNRARRI,KGRKRKRTDGRQKRHRATAQSDNRARR
5-45
1.00
1-29
0.85
0.52
0
0.00
0.84
0.09
0.02
0.12
0.07
0.01
0.02
0.03
0.05
0.49
membrane_bound
extracellular|cell_membrane
0.65
0.47
1
0.06
0.11
0.01
0.09
0.21
0.10
0.11
0.06
0.63
0.67
not_secreted
nuclear_localization_signal
nucleus
KKVRSYQEPSLSKKMRR.
0.00
0.94
0.10
0.02
0.31
0.02
0.02
0.02
0.02
0.10
0.03
not_secreted
transmembrane_domain
cell_membrane
RKKK,KRQLSVNGDGKFRRS,KKKKDEREEEKGKSK
0.00
0.08
0.07
0.01
0.14
0.33
0.19
0.13
0.05
0.83
0.05
secreted
signal_peptide
extracellular
1-26
0.97
1.00
0
0.00
0.29
0.19
0.03
0.17
0.13
0.05
0.06
0.02
0.12
0.96
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KKRWRPVDDDGPSEKRGRP
0.00
0.87
0.11
0.00
0.48
0.11
0.06
0.05
0.00
0.06
0.02
not_secreted
cytoplasm
KKRK,RKGTAKHRRKEK,RREQKQTEERSKKRQN
0.00
0.16
0.21
0.01
0.65
0.09
0.26
0.34
0.02
0.32
0.04
secreted
extracellular
nucleus
RKSK,PANKRRC
1-24
0.94
0.72
0
0.00
0.19
0.11
0.03
0.18
0.10
0.03
0.08
0.00
0.16
0.96
not_secreted
transmembrane_domain
cell_membrane
RRRR,RNRKRHR,KRGEREEKEKKKNRV
0.00
0.03
0.08
0.01
0.11
0.43
0.26
0.26
0.01
0.49
0.02
not_secreted
nuclear_localization_signal
cytoplasm
44-66
0.95
0.00
0.42
0.22
0.06
0.71
0.07
0.26
0.14
0.02
0.41
0.09
not_secreted
nuclear_localization_signal
nucleus
RKKLTMTRKSAKRKAA,KKQINKQQPPMARLKKY,LKRGKKQGGKGETVGGKETSGERRSENGGKTKERSEGGGKGAGEKKQPPAGAKMTHSQWRRTMRINKKKG
85-127
0.97
0.00
0.78
0.06
0.02
0.40
0.03
0.03
0.05
0.01
0.11
0.12
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.44
0.29
0.02
0.54
0.13
0.20
0.06
0.01
0.10
0.36
not_secreted
nucleus
KKKK,KRSR,RRKRKKRTMRRRKRRTN,GRRKRKKRTMRRRKRRT
0.00
0.60
0.08
0.09
0.30
0.16
0.05
0.13
0.07
0.10
0.23
not_secreted
nuclear_localization_signal
nucleus
0.00
0.71
0.16
0.01
0.33
0.07
0.36
0.13
0.00
0.13
0.14
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.87
0.10
0.00
0.54
0.03
0.04
0.05
0.01
0.04
0.05
secreted
extracellular
chloroplast
KREREEPILGRQRK.,RRQKLELFCEDRRRQT,KRGTKPRKEGKKRTKPK
1-30
0.96
1.00
0
0.00
0.35
0.15
0.06
0.28
0.07
0.02
0.06
0.01
0.13
0.89
not_secreted
transmembrane_domain
cell_membrane
RRRR,RRNGKSSMAIKRFAR
9-38
1.00
19-59
0.98
0.00
0.16
0.06
0.02
0.15
0.32
0.16
0.13
0.05
0.72
0.04
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
0.00
0.20
0.22
0.03
0.29
0.91
0.53
0.54
0.01
0.17
0.19
secreted
signal_peptide
extracellular
1-20
0.84
0.97
0
0.00
0.09
0.21
0.16
0.21
0.45
0.43
0.34
0.03
0.38
0.76
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
GEKPPPGPPGQPGRPGPPGPPGKPGQVGK
18-40
0.97
0.00
0.05
0.07
0.01
0.12
0.55
0.30
0.40
0.00
0.62
0.23
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.75
0.09
0.01
0.63
0.07
0.05
0.04
0.02
0.05
0.04
not_secreted
mitochondrion
0.00
0.26
0.56
0.10
0.34
0.15
0.09
0.06
0.08
0.26
0.23
not_secreted
nuclear_localization_signal
cytoplasm
RREGSSSNSGSHDHRKAHK
0.00
0.44
0.08
0.01
0.70
0.03
0.08
0.13
0.02
0.09
0.20
membrane_bound
signal_peptide|transmembrane_domain
cell_membrane
nucleus
RKKGRDGTGLKPKKY,ANRKRDQSERKKGRDGTGLKPK
1-26
1.00
1.00
1
1.00
0.16
0.02
0.01
0.25
0.23
0.52
0.30
0.00
0.66
0.11
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
LGEV,RGNSRRRRR
47-67
1.00
33-64
0.98
0.00
0.54
0.09
0.01
0.61
0.13
0.15
0.26
0.13
0.26
0.03
not_secreted
nuclear_localization_signal
nucleus
FKVK,RRDIEEREQHSRERRSRD
0.00
0.82
0.12
0.02
0.36
0.04
0.05
0.13
0.03
0.05
0.04
not_secreted
transmembrane_domain
lysosome_vacuole
0.16
0.14
0.15
0.00
0.17
0.45
0.81
0.52
0.09
0.33
0.03
not_secreted
nuclear_localization_signal
nucleus
RRAARRSRHELSHKRTHR
0.00
0.90
0.12
0.01
0.40
0.06
0.03
0.02
0.00
0.06
0.01
not_secreted
signal_peptide|transmembrane_domain
golgi_apparatus
RVAKRRM,RRIVRRNLRFTNWRRRQG
117-138
1.00
0.11
0.12
0.11
0.00
0.23
0.27
0.23
0.81
0.01
0.15
0.33
not_secreted
cytoplasm|nucleus
RRKR,RKRAGMAKGASGVIRRPAK
0.00
0.51
0.20
0.07
0.51
0.27
0.22
0.22
0.12
0.16
0.04
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
RRRK,GIVGEKGPPGQKGKRGERGTRGEKGGSGPKGKE
0.04
0.05
0.07
0.00
0.17
0.38
0.13
0.33
0.00
0.44
0.28
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum|lysosome_vacuole
0.00
0.05
0.17
0.00
0.09
0.69
0.68
0.57
0.01
0.56
0.14
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRKL
0.00
0.54
0.19
0.01
0.63
0.13
0.09
0.11
0.02
0.15
0.09