Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
–
–
–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
cell_membrane
0.00
0.12
0.20
0.01
0.21
0.21
0.03
0.08
0.01
0.34
0.16
not_secreted
nucleus
0.00
0.52
0.57
0.03
0.41
0.16
0.04
0.11
0.05
0.09
0.47
not_secreted
transmembrane_domain
cell_membrane
19-41
0.94
0.00
0.08
0.06
0.01
0.07
0.41
0.18
0.20
0.02
0.72
0.04
not_secreted
transmembrane_domain
cell_membrane
113-139
0.98
0.00
0.09
0.06
0.02
0.08
0.41
0.13
0.12
0.01
0.80
0.06
secreted
nuclear_localization_signal
nucleus
nucleus
KRKIRAINKQRHKSKGG
1-23
0.91
0.70
0
0.00
0.60
0.13
0.02
0.41
0.25
0.12
0.05
0.02
0.16
0.12
not_secreted
transmembrane_domain
cell_membrane
0.00
0.12
0.10
0.03
0.08
0.33
0.24
0.18
0.04
0.80
0.07
not_secreted
transmembrane_domain
cell_membrane
0.00
0.11
0.09
0.03
0.08
0.36
0.26
0.23
0.04
0.82
0.07
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.70
0.43
0.04
0.57
0.16
0.07
0.06
0.04
0.16
0.25
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.39
0.10
0.02
0.53
0.12
0.03
0.02
0.01
0.17
0.17
not_secreted
cytoplasm
0.00
0.19
0.38
0.35
0.66
0.32
0.29
0.27
0.06
0.22
0.30
secreted
nuclear_localization_signal
cytoplasm|nucleus
nucleus
PKKKHKAKKSSKVKTA
1-20
0.83
1.00
0
0.00
0.79
0.05
0.01
0.54
0.03
0.08
0.13
0.01
0.06
0.17
secreted
nuclear_localization_signal
cytoplasm|nucleus
nucleus
KKEIENLKNAKDKRTKL,KKELLKKEIENLKNAKDKR
1-25
0.78
0.55
0
0.00
0.69
0.26
0.01
0.53
0.10
0.11
0.15
0.02
0.10
0.32
not_secreted
cytoplasm
0.00
0.42
0.20
0.04
0.47
0.13
0.25
0.26
0.06
0.19
0.21
not_secreted
transmembrane_domain
cell_membrane
2-22
0.80
0.00
0.20
0.14
0.04
0.11
0.32
0.20
0.28
0.02
0.58
0.02
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KKKASKNDGGQKKEKL,KRNEKIIDEMLKNKKV,PKSKIEKPFNMPKTIIAKPNDVPKQKNAKKKASKNDGGQKKEK
0.00
0.54
0.17
0.02
0.56
0.09
0.12
0.10
0.01
0.17
0.12
not_secreted
cytoplasm|nucleus
0.00
0.51
0.20
0.02
0.50
0.12
0.14
0.15
0.01
0.03
0.41
not_secreted
mitochondrion
53-86
0.96
0.00
0.43
0.50
0.02
0.32
0.11
0.06
0.03
0.05
0.13
0.14
not_secreted
mitochondrion
53-86
0.96
0.00
0.24
0.50
0.02
0.42
0.25
0.14
0.11
0.15
0.22
0.29
not_secreted
signal_peptide
golgi_apparatus
0.11
0.08
0.13
0.00
0.17
0.38
0.11
0.83
0.02
0.11
0.49
secreted
nuclear_export_signal
cytoplasm|nucleus
1-20
0.98
1.00
0
0.00
0.63
0.47
0.00
0.74
0.22
0.16
0.10
0.08
0.09
0.02
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.58
0.44
0.01
0.75
0.24
0.10
0.07
0.04
0.09
0.04
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.57
0.46
0.01
0.74
0.25
0.11
0.08
0.04
0.09
0.04
not_secreted
nuclear_localization_signal
nucleus
RRKR
0.00
0.94
0.07
0.00
0.29
0.04
0.02
0.01
0.00
0.03
0.19
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
0.00
0.07
0.04
0.03
0.09
0.50
0.10
0.12
0.01
0.86
0.05
not_secreted
transmembrane_domain
cell_membrane
20-51
0.85
0.00
0.12
0.15
0.10
0.06
0.33
0.25
0.26
0.03
0.77
0.05
not_secreted
transmembrane_domain
cell_membrane
49-69
0.99
0.00
0.07
0.10
0.14
0.12
0.38
0.05
0.08
0.07
0.76
0.08
not_secreted
transmembrane_domain
cell_membrane
0.00
0.21
0.07
0.03
0.09
0.39
0.17
0.12
0.03
0.63
0.02
not_secreted
cell_membrane
0.00
0.07
0.29
0.01
0.24
0.33
0.11
0.10
0.12
0.57
0.22
not_secreted
transmembrane_domain
cell_membrane
49-69
0.98
0.00
0.15
0.09
0.07
0.12
0.37
0.13
0.12
0.05
0.74
0.03
secreted
cytoplasm
chloroplast
5-26
0.97
1-23
0.88
1.00
0
0.00
0.42
0.37
0.04
0.53
0.07
0.11
0.12
0.06
0.24
0.31
not_secreted
mitochondrion
0.00
0.42
0.49
0.04
0.47
0.16
0.02
0.03
0.08
0.15
0.23
secreted
nuclear_localization_signal
nucleus
chloroplast
5-26
0.97
1-23
0.88
1.00
0
0.00
0.56
0.25
0.03
0.40
0.09
0.08
0.10
0.01
0.06
0.36
secreted
nuclear_localization_signal
nucleus
1-23
0.68
1.00
0
0.00
0.53
0.40
0.01
0.33
0.20
0.21
0.06
0.01
0.30
0.55
not_secreted
nuclear_localization_signal
nucleus
KKRK
97-120
1.00
27-63
1.00
0.00
0.56
0.11
0.03
0.46
0.06
0.05
0.03
0.00
0.12
0.08
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
PKNKRSR,RKRVKATGVTEKGYSNKKK,KRVKATGVTEKGYSNKKKD,QKKEKLVNKRIRQSPRKRVKA
0.00
0.87
0.13
0.01
0.49
0.03
0.01
0.02
0.03
0.02
0.02
not_secreted
nuclear_localization_signal
nucleus
20-42
0.99
0.00
0.51
0.05
0.01
0.35
0.04
0.09
0.02
0.00
0.06
0.07
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
0.00
0.17
0.06
0.02
0.36
0.61
0.51
0.49
0.06
0.33
0.30
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
RRVGLEKKK
0.00
0.17
0.10
0.01
0.38
0.79
0.37
0.49
0.09
0.30
0.28
secreted
signal_peptide|transmembrane_domain
cell_membrane
chloroplast
12-34
0.98
1-33
0.86
1.00
0
0.00
0.27
0.05
0.02
0.28
0.15
0.55
0.35
0.05
0.70
0.09
not_secreted
nuclear_localization_signal
nucleus
0.00
0.52
0.33
0.03
0.39
0.09
0.24
0.11
0.03
0.11
0.12
not_secreted
nuclear_localization_signal
nucleus
KKGTSRQCKNWALREKCK
0.00
0.53
0.09
0.02
0.45
0.16
0.05
0.02
0.00
0.10
0.09
secreted
extracellular
1-23
0.82
1.00
0
0.00
0.47
0.43
0.02
0.26
0.17
0.10
0.10
0.01
0.25
0.70
secreted
signal_peptide
extracellular
1-25
0.97
1.00
0
1.00
0.37
0.30
0.14
0.09
0.17
0.02
0.10
0.02
0.05
0.99
membrane_bound
signal_peptide|transmembrane_domain
cell_membrane
nucleus
TSRGRAKLPKAGQNGPFASPRPRA
1-16
0.80
1.00
4
4.00
0.05
0.07
0.02
0.13
0.27
0.22
0.26
0.03
0.71
0.06
membrane_bound
signal_peptide
endoplasmic_reticulum
1-20
0.99
1.00
1
1.00
0.29
0.37
0.04
0.18
0.74
0.27
0.28
0.12
0.19
0.10
not_secreted
nuclear_localization_signal
nucleus
QVKKQKTK
0.00
0.80
0.13
0.01
0.37
0.04
0.04
0.03
0.02
0.10
0.19
secreted
extracellular
1-21
1.00
1.00
0
0.00
0.50
0.26
0.14
0.21
0.16
0.05
0.05
0.02
0.15
0.90
not_secreted
extracellular
0.00
0.26
0.49
0.22
0.48
0.09
0.03
0.08
0.02
0.14
0.61
not_secreted
cell_membrane
44-64
1.00
0.00
0.03
0.10
0.00
0.11
0.15
0.13
0.15
0.04
0.84
0.44
not_secreted
nuclear_localization_signal
nucleus
GEKRNRNGRKRT
0.00
0.95
0.11
0.04
0.26
0.01
0.01
0.01
0.01
0.05
0.02