Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_localization_signal
nucleus
KRAR,KRIR,AKSGREKKRTRNTRKR
0.00
0.87
0.05
0.01
0.30
0.06
0.05
0.10
0.02
0.05
0.01
not_secreted
nuclear_export_signal
cytoplasm
GRKKVRKDGKD
3-26
0.99
17-38
1.00
0.00
0.39
0.17
0.02
0.70
0.08
0.12
0.26
0.15
0.22
0.04
not_secreted
nucleus
KRENIRKRRK
13-73
0.99
0.00
0.52
0.21
0.10
0.30
0.39
0.05
0.17
0.03
0.14
0.35
not_secreted
nuclear_localization_signal
cytoplasm
KKYLTKDVVDACKDKRTKL
0.00
0.34
0.40
0.08
0.79
0.13
0.10
0.17
0.01
0.30
0.10
not_secreted
signal_peptide
cell_membrane
0.00
0.10
0.04
0.02
0.19
0.24
0.39
0.13
0.01
0.41
0.27
secreted
signal_peptide
extracellular
1-23
0.97
1.00
0
0.00
0.06
0.22
0.02
0.24
0.23
0.13
0.19
0.01
0.07
0.80
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
81-104
0.99
0.00
0.13
0.11
0.01
0.27
0.29
0.27
0.22
0.09
0.55
0.08
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.68
0.10
0.03
0.59
0.18
0.33
0.18
0.00
0.05
0.13
not_secreted
transmembrane_domain
cell_membrane
43-94
0.90
0.00
0.21
0.16
0.01
0.22
0.31
0.28
0.26
0.02
0.40
0.09
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRRS,RRRRMTTSSDRRGDK,KGRTKNKREGGRGGRKGKQGGGRGGE
0.00
0.72
0.11
0.03
0.66
0.05
0.04
0.05
0.03
0.24
0.11
not_secreted
nuclear_localization_signal
cytoplasm
KKMVAELEEKWTKSRRE,RRKESVGSEEEWGRREKE,RRVEELEHILNETNREAKK,RREEKIKELIDQIGDKERK
34-74
0.77
0.00
0.45
0.13
0.00
0.72
0.06
0.08
0.12
0.01
0.16
0.15
not_secreted
nuclear_localization_signal
nucleus
RRKR,RRRK
39-67
1.00
0.00
0.90
0.19
0.00
0.37
0.04
0.06
0.04
0.01
0.06
0.02
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRELERTTDGEYWKTRKT,NRREQSKSREREKRMRSDLLGNRVKPKALKPEKFM
0.00
0.70
0.11
0.01
0.56
0.07
0.04
0.08
0.01
0.05
0.03
secreted
nuclear_localization_signal
extracellular
1-23
0.91
1.00
0
0.00
0.35
0.40
0.19
0.27
0.40
0.17
0.18
0.01
0.26
0.86
not_secreted
cytoplasm|nucleus|peroxisome
0.00
0.55
0.29
0.02
0.56
0.10
0.09
0.17
0.81
0.08
0.14
not_secreted
nuclear_localization_signal
cytoplasm
RKRENEQKTEIIERQRER,NKRKSGGKTKEQPKAKQQKKEEQRRTTAKGEEQNAKKVKLIKQIEKGSKEKRKR
68-97
0.99
0.00
0.41
0.13
0.01
0.72
0.07
0.04
0.07
0.18
0.27
0.09
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.32
0.25
0.01
0.58
0.09
0.34
0.31
0.05
0.33
0.17
not_secreted
cytoplasm
ERKRKNRKNKA,RKGATNRIQRERPKKN,RKNKAMMEEEEEKERKN,RRPLFPKSKFLRKAQKLRK,RKNKLMMEEEEEEEERKRK,RKNRKNKAMMEEEEEKERK
33-54
1.00
0.00
0.25
0.19
0.02
0.54
0.19
0.18
0.26
0.14
0.46
0.10
not_secreted
nuclear_localization_signal
cytoplasm
0.00
0.28
0.16
0.01
0.66
0.09
0.24
0.19
0.01
0.48
0.09
not_secreted
nuclear_localization_signal
nucleus
KRLQNQMLRMELRKRHRE
0.00
0.89
0.06
0.01
0.26
0.01
0.02
0.03
0.02
0.05
0.06
not_secreted
mitochondrion
0.00
0.28
0.63
0.24
0.44
0.37
0.31
0.30
0.03
0.10
0.11
not_secreted
nuclear_localization_signal
nucleus
RTVKRRP
21-47
0.98
0.00
0.55
0.22
0.06
0.42
0.14
0.03
0.04
0.03
0.17
0.20
not_secreted
nuclear_localization_signal
cytoplasm
KKRK,KRRK,KRSR,AAAED,RKSSSSSRSRSRKLRN,KRWENLNEWMEKREKV,RRQTALQNQINGIQRRHLK,RRSVALLGKRMSDLKMKLK
33-54
0.98
0.00
0.20
0.11
0.02
0.72
0.13
0.18
0.31
0.01
0.53
0.11
not_secreted
signal_peptide
cytoplasm
KRRK,RPRR,RRRVHEAGDECGRRQRL,RRSVALLGKRMSDLKMKLK,RRRDSRRRVGQERRSKLKVKWK
0.00
0.19
0.20
0.01
0.62
0.15
0.09
0.22
0.05
0.24
0.20
secreted
extracellular
nucleus
AKRKRNGA,KREIEADAERKKKCD
1-24
0.83
1.00
0
0.00
0.19
0.29
0.03
0.21
0.21
0.03
0.11
0.01
0.21
0.91
not_secreted
signal_peptide
extracellular
0.01
0.12
0.17
0.01
0.22
0.15
0.11
0.10
0.01
0.14
0.92
not_secreted
nuclear_localization_signal
nucleus
HHRQGKGRKHRI,KKALARAERRRLRRA,RRATPKYRSLHANRERQR
0.00
0.85
0.19
0.01
0.43
0.06
0.07
0.07
0.00
0.05
0.06
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.65
0.15
0.02
0.53
0.15
0.13
0.06
0.03
0.12
0.15
secreted
extracellular
KRRR,LGEV,RLGKRRP,RRLSFAEPIAKLPKK,KRRPAEWKDVKLRRKGEK,RRKGEKTSNRKRGRRAPK,RRGGTLPANCRVQKKRAE,KRAPRHRRSKKHRRSRGH,KKKGRRGGTLPANCRVQKK,KKGRRGGTLPANCRVQKKR,RRQSAPLGDLLRDLQRKGR
36-56
0.98
1-32
1.00
0.00
0.33
0.33
0.01
0.23
0.10
0.07
0.20
0.22
0.21
0.70
not_secreted
signal_peptide
extracellular
0.00
0.10
0.44
0.12
0.36
0.20
0.08
0.14
0.26
0.20
0.79
membrane_bound
transmembrane_domain
cell_membrane
nucleus
KRPTQPPIIRRNERK,RKANAQRCQMRVIRRRTT
1-19
0.96
0.99
7
5.00
0.05
0.08
0.02
0.08
0.32
0.25
0.13
0.02
0.84
0.06
not_secreted
transmembrane_domain
cell_membrane
34-62
0.96
38-58
0.96
0.00
0.16
0.17
0.01
0.14
0.31
0.45
0.41
0.02
0.68
0.06
membrane_bound
signal_peptide|transmembrane_domain
cell_membrane
nucleus
RERKRFK,RKRWKYEYYTEKQRER
1-21
0.95
1.00
3
1.00
0.07
0.01
0.15
0.15
0.24
0.55
0.25
0.01
0.62
0.02
not_secreted
nuclear_localization_signal
nucleus
0.08
0.60
0.36
0.03
0.43
0.12
0.18
0.10
0.02
0.16
0.13
secreted
nucleus|extracellular
1-18
0.99
1.00
0
0.00
0.54
0.38
0.01
0.43
0.14
0.08
0.12
0.03
0.22
0.71
not_secreted
cytoplasm
0.00
0.33
0.60
0.06
0.60
0.09
0.19
0.11
0.14
0.13
0.18
not_secreted
transmembrane_domain
cell_membrane
0.00
0.03
0.13
0.01
0.11
0.38
0.46
0.31
0.01
0.60
0.04
not_secreted
transmembrane_domain
cell_membrane
0.00
0.03
0.12
0.01
0.13
0.41
0.47
0.21
0.01
0.50
0.04
not_secreted
signal_peptide
extracellular
RTRKRRC,RKRRCSGDCPPATGRRRLP,KRRCSGDCPPATGRRRLPK,RRCSGDCPPATGRRRLPKR
0.00
0.25
0.47
0.00
0.31
0.40
0.21
0.51
0.01
0.16
0.64
not_secreted
signal_peptide|transmembrane_domain
lysosome_vacuole|golgi_apparatus
0.00
0.06
0.06
0.05
0.12
0.45
0.72
0.71
0.14
0.25
0.05
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
64-84
0.92
0.00
0.18
0.13
0.05
0.14
0.46
0.51
0.39
0.09
0.51
0.24
not_secreted
nuclear_localization_signal|nuclear_export_signal
cytoplasm|nucleus
0.00
0.58
0.17
0.01
0.70
0.13
0.13
0.15
0.05
0.25
0.07
secreted
cell_membrane
nucleus
RKDSPLAAPIRNRRDRA
1-24
0.85
1.00
0
0.00
0.21
0.28
0.04
0.21
0.15
0.10
0.23
0.04
0.56
0.28
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
RHRR,RPHQHRHR,KRFTIPVIVSDRKGKQ
16-96
1.00
0.00
0.12
0.02
0.01
0.24
0.26
0.42
0.42
0.05
0.77
0.21
not_secreted
cytoplasm
82-103
0.99
28-104
1.00
0.00
0.22
0.15
0.02
0.55
0.20
0.32
0.55
0.04
0.55
0.09
not_secreted
transmembrane_domain
cell_membrane
RLKKRRI
47-98
0.98
11-51
1.00
0.00
0.10
0.04
0.01
0.16
0.32
0.14
0.26
0.00
0.82
0.16
not_secreted
cytoplasm
0.00
0.15
0.46
0.05
0.58
0.37
0.46
0.40
0.02
0.35
0.06
membrane_bound
transmembrane_domain
cell_membrane
nucleus
HRERLSRRNPH,KRVYSRRYSLLRHRARRS
1-21
0.98
1.00
4
3.00
0.06
0.10
0.04
0.14
0.12
0.24
0.23
0.04
0.78
0.02
secreted
cytoplasm
chloroplast
RKSK,RKGVEEKEEEERKREL,KKKEEEEEAQRNRKREE,KRREKVQRSAAERLCRR,RKMEDECAKKTEFRKCFR,RKRIEFWDVRKKERWKEKR,KRIEFWDVRKKERWKEKRK,KKKTNEEEGERKCRRKREE,VRKKERWKEKRKREAEREEGNERKEEKEEKEKRREKEKWKEEKKKEEEEEAQRNRKRE
64-93
0.98
1-22
0.99
1.00
0
0.00
0.30
0.10
0.01
0.67
0.24
0.24
0.24
0.04
0.44
0.21
not_secreted
nucleus
RRRR
54-74
0.99
30-80
1.00
0.00
0.53
0.46
0.07
0.38
0.14
0.05
0.04
0.19
0.05
0.49