Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
signal_peptide|transmembrane_domain
cell_membrane|lysosome_vacuole
KKSILSALFCCIRNIRK
0.00
0.19
0.04
0.01
0.33
0.46
0.59
0.27
0.05
0.62
0.13
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
PPGPPGKPGPKGLSGEKGAPGIAGKNGVPGPKGPP
16-45
0.98
0.00
0.04
0.05
0.01
0.14
0.55
0.29
0.37
0.00
0.77
0.14
secreted
nuclear_localization_signal
nucleus
nucleus
KRMARKGKGETEEGKAKRA,KRRTDKSGKRRGKQRGQRRRSTAKRMARKGKGETEEGKAKR
1-16
0.94
1.00
0
0.00
0.62
0.13
0.04
0.34
0.10
0.02
0.03
0.01
0.21
0.46
secreted
extracellular
chloroplast
19-41
0.69
1-26
0.92
0.67
0
0.00
0.29
0.23
0.16
0.40
0.44
0.33
0.28
0.09
0.41
0.49
not_secreted
extracellular
0.00
0.25
0.20
0.05
0.22
0.09
0.09
0.06
0.02
0.20
0.93
not_secreted
cytoplasm
16-36
1.00
0.00
0.44
0.55
0.53
0.61
0.51
0.08
0.22
0.16
0.31
0.36
secreted
signal_peptide
extracellular
mitochondria
37-66
0.98
1-22
0.99
1.00
0
0.00
0.27
0.28
0.10
0.23
0.31
0.21
0.29
0.05
0.18
0.80
secreted
cell_membrane
1-24
0.92
0.61
0
0.00
0.02
0.10
0.00
0.07
0.18
0.24
0.14
0.04
0.86
0.16
not_secreted
transmembrane_domain
cell_membrane
RKKR
0.00
0.09
0.10
0.01
0.11
0.28
0.20
0.15
0.02
0.89
0.06
not_secreted
nuclear_localization_signal
cytoplasm
KRQK,RVEKRPK,RVRRKRDGR,RRSDTVREEKKRRVM,KRPKASVVPFKVTEWRVRR
30-50
0.99
15-71
1.00
0.00
0.29
0.22
0.06
0.61
0.25
0.16
0.32
0.07
0.48
0.08
secreted
extracellular
0.98
0.41
0
0.17
0.09
0.05
0.22
0.11
0.09
0.08
0.06
0.23
0.76
secreted
cytoplasm
0.62
0.01
0
0.33
0.26
0.07
0.40
0.36
0.11
0.32
0.04
0.15
0.32
not_secreted
mitochondrial_transit_peptide
mitochondrion
0.00
0.13
0.76
0.01
0.42
0.06
0.21
0.36
0.08
0.12
0.15
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum|golgi_apparatus
RKRR
50-71
1.00
0.00
0.12
0.06
0.01
0.21
0.63
0.21
0.74
0.02
0.21
0.36
secreted
signal_peptide
golgi_apparatus
1-35
0.52
0.00
0.07
0.06
0.01
0.28
0.38
0.42
0.91
0.01
0.13
0.52
not_secreted
transmembrane_domain
cell_membrane
0.00
0.18
0.07
0.01
0.19
0.31
0.51
0.27
0.01
0.59
0.03
secreted
extracellular
nucleus
KRGSLGPRPLRFGRR
1-25
0.98
0.99
0
0.00
0.42
0.36
0.11
0.18
0.25
0.01
0.03
0.01
0.03
0.84
not_secreted
nuclear_localization_signal
nucleus
6-30
0.90
0.00
0.85
0.11
0.01
0.27
0.05
0.06
0.05
0.01
0.07
0.10
not_secreted
signal_peptide
extracellular
RQGKARQRREMGR
4-37
0.93
15-35
1.00
0.00
0.16
0.09
0.07
0.19
0.32
0.18
0.21
0.00
0.17
0.62
secreted
extracellular
1-23
0.98
1.00
0
0.00
0.34
0.39
0.02
0.27
0.15
0.18
0.24
0.03
0.19
0.77
secreted
extracellular
1-22
0.99
1.00
0
0.00
0.21
0.27
0.05
0.19
0.08
0.18
0.08
0.00
0.24
0.96
secreted
extracellular
chloroplast
RRLRLRQTKIRTFRRQTK
70-90
1.00
41-89
0.82
0.87
0.27
0
0.39
0.32
0.03
0.21
0.03
0.02
0.05
0.46
0.08
0.80
not_secreted
nuclear_localization_signal
cytoplasm
RKSSRFGTKTELKKRGQ
0.00
0.21
0.21
0.02
0.71
0.11
0.17
0.25
0.04
0.47
0.19
not_secreted
nuclear_localization_signal
nucleus
KKKPR,KKWSVHVLKLSRTKRH
0.00
0.93
0.03
0.01
0.20
0.02
0.04
0.03
0.01
0.04
0.07
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KRTFSDDLNFYPAKRKSN
0.00
0.78
0.03
0.00
0.51
0.07
0.03
0.10
0.01
0.10
0.05
not_secreted
nuclear_export_signal
cytoplasm
RRLSEFSQNPINKKMNK
0.00
0.40
0.11
0.01
0.60
0.15
0.32
0.25
0.07
0.35
0.04
not_secreted
nuclear_localization_signal
nucleus
KKRK,KKNQRQQHRRERRAKQR,RQQHRRERRAKQREEKRFETKG
0.00
0.96
0.19
0.01
0.26
0.03
0.08
0.03
0.00
0.03
0.07
not_secreted
cytoplasm
0.00
0.37
0.20
0.15
0.52
0.22
0.19
0.07
0.25
0.11
0.08
not_secreted
nuclear_localization_signal
cytoplasm
AKKEQKPEKQKGAKEEKPKSAKEEKPKKKAK
0.00
0.33
0.14
0.04
0.71
0.25
0.08
0.17
0.01
0.09
0.12
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRKR
0.00
0.52
0.10
0.01
0.56
0.05
0.10
0.14
0.01
0.07
0.03
not_secreted
transmembrane_domain
cell_membrane
RHRR,RKFLNAINEFRRIKW
31-60
0.97
68-109
1.00
0.00
0.08
0.14
0.03
0.07
0.23
0.34
0.25
0.01
0.80
0.02
not_secreted
cytoplasm|nucleus
0.00
0.57
0.08
0.01
0.58
0.20
0.13
0.26
0.42
0.06
0.17
secreted
extracellular
nucleus
RRRRRR
1-19
1.00
1.00
0
0.00
0.21
0.20
0.06
0.17
0.03
0.04
0.10
0.14
0.16
0.96
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
0.00
0.70
0.18
0.16
0.49
0.03
0.06
0.05
0.01
0.08
0.38
not_secreted
nuclear_export_signal
cytoplasm|nucleus
RRRR
0.00
0.77
0.18
0.03
0.51
0.06
0.10
0.07
0.11
0.04
0.02
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KKKK
0.00
0.69
0.12
0.01
0.67
0.22
0.15
0.16
0.05
0.07
0.06
not_secreted
nuclear_localization_signal
nucleus
KVKK,KKACPDDYRKLRNLRKKRQ
0.00
0.83
0.08
0.01
0.44
0.06
0.04
0.04
0.02
0.06
0.03
not_secreted
lysosome_vacuole
0.00
0.29
0.10
0.02
0.33
0.41
0.64
0.65
0.02
0.48
0.09
not_secreted
nuclear_localization_signal
cytoplasm
PDTKRTR,RKGRGGIFKSHSKHRKG,SAGRKVGLIAARRTGRIRGGKPEKRGKE
3-23
0.99
0.00
0.43
0.32
0.07
0.56
0.23
0.16
0.16
0.01
0.09
0.05
not_secreted
signal_peptide|transmembrane_domain
cell_membrane|lysosome_vacuole
LRRLRKRRHKGKAK
0.00
0.09
0.06
0.03
0.18
0.21
0.65
0.28
0.40
0.84
0.32
not_secreted
nuclear_export_signal
cytoplasm|nucleus
KKRK,KRKH,KRAEEEKEWPKPTRK
0.00
0.65
0.16
0.02
0.56
0.10
0.38
0.25
0.12
0.16
0.03
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
RRTRRIIQRLTARLRER,TARLRERNFKAIQKARDVRKRAIAAKEA
52-72
1.00
11-68
0.69
0.00
0.21
0.07
0.16
0.34
0.34
0.53
0.27
0.01
0.54
0.48
not_secreted
transmembrane_domain
endoplasmic_reticulum
7-27
1.00
35-58
0.99
0.00
0.21
0.16
0.02
0.18
0.80
0.16
0.36
0.01
0.23
0.01
not_secreted
cytoplasm
KKRGRTDEWMIRKSQK,IRKSQKWRQGQIKDKRTKDGKDKRIKDGKAIAK
42-62
0.95
0.00
0.23
0.07
0.02
0.29
0.19
0.24
0.11
0.01
0.21
0.14
not_secreted
nucleus
0.00
0.55
0.19
0.16
0.47
0.07
0.04
0.12
0.06
0.10
0.27
secreted
nucleus
nucleus
RKAAKETDRTEENTKKLGR,KGVFGRAKEGRRRNERKAAKE
1-17
0.99
1.00
0
0.00
0.59
0.10
0.07
0.36
0.08
0.04
0.06
0.09
0.14
0.42
secreted
extracellular
chloroplast
46-67
0.95
11-32
0.97
0.60
0.50
0
0.28
0.50
0.18
0.36
0.06
0.07
0.04
0.13
0.08
0.71
not_secreted
nuclear_export_signal
cytoplasm
KRKL
0.00
0.43
0.13
0.03
0.61
0.14
0.33
0.29
0.06
0.30
0.05
not_secreted
nuclear_localization_signal
nucleus
PIKLRKSNWKERNLDIVKKKNKAKKKL
65-88
0.97
0.00
0.84
0.05
0.00
0.42
0.09
0.01
0.02
0.01
0.07
0.01
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
RKRRR,RRMEEREEEEEEGTEWRRK,WRRKSEERKSGRREEEKEGGGKKRRKPRGKRRSALRRN
75-95
1.00
33-98
0.80
0.00
0.24
0.06
0.10
0.33
0.35
0.21
0.13
0.10
0.66
0.12