Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
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–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Secretion DL-signals DL-localization Localizer L-nucleus L-mitochondria (score) L-chloroplast (score) Signal Peptide (score_v5) (score_v6) (TM_v5) (TM_v6) nucleus mitochondrion plastid cytoplasm endoplasmic_reticulum lysosome_vacuole golgi_apparatus peroxisome peroxisome extracellular
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.65
0.46
0.02
0.51
0.11
0.20
0.11
0.14
0.11
0.11
secreted
nuclear_localization_signal
nucleus
1-26
0.51
0.55
0
0.00
0.61
0.33
0.10
0.28
0.54
0.11
0.15
0.06
0.21
0.22
secreted
cytoplasm
1-20
0.95
1.00
0
0.00
0.29
0.36
0.12
0.54
0.40
0.33
0.37
0.03
0.17
0.46
not_secreted
transmembrane_domain
endoplasmic_reticulum|golgi_apparatus
33-93
0.99
0.00
0.13
0.12
0.01
0.24
0.61
0.52
0.69
0.04
0.37
0.01
not_secreted
transmembrane_domain
endoplasmic_reticulum
16-65
0.85
0.00
0.22
0.20
0.00
0.13
0.73
0.22
0.56
0.01
0.25
0.01
not_secreted
extracellular
0.00
0.18
0.07
0.05
0.25
0.06
0.05
0.06
0.10
0.15
0.86
not_secreted
signal_peptide|transmembrane_domain
cell_membrane
50-70
1.00
5-30
0.99
0.00
0.07
0.10
0.03
0.10
0.32
0.21
0.15
0.11
0.79
0.08
not_secreted
nuclear_localization_signal
nucleus
4-24
1.00
0.00
0.63
0.33
0.04
0.46
0.09
0.09
0.11
0.21
0.07
0.18
not_secreted
cytoplasm|nucleus
RKRRRRRGIGM,RRLFPASVILHLRKRRRRR
4-24
1.00
0.00
0.54
0.45
0.04
0.50
0.13
0.02
0.03
0.16
0.03
0.17
not_secreted
signal_peptide
endoplasmic_reticulum
1-26
0.94
15-35
0.99
0.00
0.06
0.39
0.01
0.30
0.63
0.16
0.62
0.05
0.04
0.31
secreted
signal_peptide
extracellular
1-44
0.84
0.00
0.21
0.36
0.24
0.20
0.19
0.05
0.17
0.18
0.16
0.96
not_secreted
signal_peptide
cytoplasm
54-82
0.98
15-86
1.00
0.10
0.26
0.30
0.22
0.48
0.22
0.17
0.27
0.11
0.35
0.33
not_secreted
nuclear_localization_signal
nucleus
RKGKKRTRKERAETEEKRK,KKRTRKERAETEEKRKKAD,KRKKADEEKRKRTDQTKRR,RKKADEEKRKRTDQTKRRV,KKADEEKRKRTDQTKRRVF,VREGLRLSSKSRVPPPMASPKHRKYKQRIVRRI
15-68
0.99
0.00
0.69
0.21
0.10
0.39
0.05
0.03
0.04
0.05
0.04
0.10
not_secreted
cytoplasm|nucleus
0.00
0.68
0.26
0.08
0.51
0.09
0.18
0.13
0.16
0.15
0.28
not_secreted
mitochondrial_transit_peptide
mitochondrion
11-33
1.00
0.00
0.08
0.93
0.01
0.15
0.12
0.05
0.13
0.04
0.08
0.02
not_secreted
nuclear_localization_signal
nucleus
RRRR,KRTRRLAKKLQKEERRRAE,KKKWESEGKANVSVKKAEK,KVLDRKRLEKILREKEEKQRLKEIETPDEKRTRRLAKKLQKEERRR
0.00
0.89
0.07
0.00
0.26
0.09
0.06
0.12
0.01
0.07
0.05
secreted
extracellular
nucleus
KRNPGTGTLYCYDGINKKR
1-16
0.99
1.00
0
0.00
0.30
0.18
0.10
0.28
0.22
0.08
0.14
0.03
0.37
0.62
not_secreted
mitochondrial_transit_peptide
mitochondrion
3-32
0.93
0.00
0.05
0.95
0.03
0.12
0.02
0.03
0.04
0.00
0.03
0.02
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
5-25
0.99
0.00
0.11
0.12
0.03
0.09
0.93
0.33
0.60
0.02
0.12
0.05
not_secreted
mitochondrial_transit_peptide
mitochondrion
RETKRKQ,RKYEKVIGKTAKEFKK
0.00
0.21
0.83
0.14
0.23
0.04
0.07
0.08
0.10
0.07
0.02
not_secreted
mitochondrial_transit_peptide
mitochondrion
KRVVANAGEDAHLAEWRRK
41-61
1.00
9-60
1.00
0.00
0.17
0.89
0.05
0.41
0.04
0.04
0.07
0.18
0.05
0.09
not_secreted
nuclear_export_signal
nucleus
0.00
0.71
0.16
0.01
0.47
0.17
0.23
0.20
0.07
0.07
0.05
not_secreted
nucleus
0.00
0.57
0.48
0.04
0.34
0.13
0.02
0.02
0.02
0.12
0.28
not_secreted
peroxisomal_targeting_signal
cytoplasm
0.00
0.47
0.52
0.23
0.63
0.39
0.21
0.08
0.30
0.17
0.07
not_secreted
cytoplasm
KRHNHPKKSRRHQRHRRG,KRKLLPKIHGKNGVSVKRSGRRDARRRRGRDKPDGPRKPLPSRTLMQKRHNHPKKSRRHQRHRR
0.00
0.50
0.30
0.15
0.49
0.10
0.02
0.04
0.53
0.13
0.36
not_secreted
nuclear_localization_signal
nucleus
KRKL,RRDIVDQIVGVIDRDRSR,RKLLSKINARNSTQKREQK,KLLSKINARNSTQKREQKREKRRTKIAKATKAR
0.00
0.91
0.19
0.07
0.32
0.05
0.04
0.03
0.01
0.07
0.16
not_secreted
nuclear_localization_signal
nucleus
RKKIEILQKSRKRKFL,RRRSHHANFGGCNIQQRRR,RRSHHANFGGCNIQQRRRN
0.00
0.84
0.33
0.04
0.22
0.05
0.03
0.04
0.04
0.01
0.14
not_secreted
cytoplasm
0.00
0.25
0.55
0.03
0.74
0.12
0.19
0.09
0.05
0.15
0.21
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.65
0.14
0.01
0.59
0.14
0.23
0.20
0.02
0.06
0.04
not_secreted
nuclear_export_signal
cytoplasm|nucleus
0.00
0.56
0.08
0.02
0.54
0.31
0.33
0.30
0.02
0.12
0.04
not_secreted
mitochondrial_transit_peptide
cytoplasm|mitochondrion
1-25
0.99
0.00
0.16
0.69
0.02
0.50
0.09
0.18
0.28
0.07
0.09
0.34
not_secreted
mitochondrial_transit_peptide
mitochondrion
RRMETSANNLYKEKRIRG
27-47
1.00
0.00
0.12
0.86
0.02
0.15
0.16
0.07
0.06
0.02
0.05
0.07
not_secreted
signal_peptide
extracellular
KRIR,RKGERVTMNCTEMRRKWE,RRKWEEGEVATKGRRHKKS
0.00
0.17
0.21
0.06
0.34
0.12
0.06
0.13
0.01
0.21
0.93
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
8-28
1.00
0.00
0.13
0.18
0.01
0.07
0.59
0.46
0.32
0.28
0.35
0.05
not_secreted
nuclear_export_signal
cytoplasm
KKNQCEHLLELKRKPN
0.00
0.47
0.30
0.02
0.73
0.27
0.22
0.45
0.05
0.41
0.04
not_secreted
mitochondrion|endoplasmic_reticulum
5-25
1.00
0.00
0.34
0.68
0.01
0.33
0.68
0.11
0.52
0.01
0.12
0.04
membrane_bound
signal_peptide|transmembrane_domain
endoplasmic_reticulum
nucleus
KKSPNVKKADSKKTK.,KKKEAERRKEQQSAKKNAKESAEKANGQKEVLSDEKKSPNVKKADSKKTK
1-20
0.99
1.00
1
1.00
0.14
0.20
0.02
0.18
0.96
0.32
0.45
0.01
0.18
0.02
not_secreted
plastid
KTEEG,KKEHLLLVHSKKYLR,RRDEIVFGAAIRRRVP
0.00
0.48
0.31
0.52
0.37
0.43
0.12
0.27
0.11
0.25
0.23
secreted
signal_peptide
extracellular
nucleus
PRRRRRQAG,KKACFMSVLHWSEARKAER,RRRRRQAGKADGTLRRCTR,RRRRQAGKADGTLRRCTRR
1-25
0.97
0.80
0
0.00
0.10
0.14
0.02
0.14
0.19
0.11
0.12
0.06
0.23
0.91
membrane_bound
signal_peptide|transmembrane_domain
cell_membrane|lysosome_vacuole
chloroplast
43-113
1.00
1-28
0.95
1.00
1
1.00
0.17
0.06
0.19
0.36
0.31
0.68
0.39
0.12
0.59
0.25
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
46-80
0.95
59-79
0.99
0.00
0.55
0.12
0.03
0.50
0.22
0.29
0.23
0.01
0.24
0.03
not_secreted
nuclear_localization_signal
nucleus
0.00
0.88
0.22
0.01
0.41
0.06
0.02
0.02
0.01
0.02
0.06
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
KVKK
14-39
0.98
0.00
0.65
0.10
0.03
0.62
0.09
0.06
0.08
0.02
0.05
0.02
not_secreted
signal_peptide|transmembrane_domain
endoplasmic_reticulum
RRRHNQMPTYLSVRKRDKN
85-107
0.99
79-105
1.00
0.00
0.06
0.03
0.01
0.15
0.62
0.49
0.53
0.01
0.56
0.02
not_secreted
nuclear_localization_signal
nucleus
QAKVPAKKRGRPPGRR,KRVQSPTDDTTSQRPRRS,KKKKKRVGTASPGKRGRP,KRQKGVRGPKPAQEKGLKR
0.00
0.98
0.02
0.03
0.16
0.02
0.02
0.02
0.01
0.03
0.04
not_secreted
signal_peptide|transmembrane_domain
golgi_apparatus
0.01
0.12
0.06
0.01
0.22
0.46
0.58
0.67
0.02
0.51
0.25
not_secreted
mitochondrial_transit_peptide
mitochondrion
7-27
0.99
12-42
0.99
0.00
0.13
0.95
0.10
0.19
0.04
0.01
0.06
0.03
0.04
0.03
not_secreted
transmembrane_domain
golgi_apparatus
53-73
0.99
0.00
0.14
0.11
0.05
0.14
0.54
0.49
0.68
0.01
0.39
0.06
not_secreted
nuclear_localization_signal
cytoplasm|nucleus
RRVKEDEKTKWRKERE,KRLLEEKEERIREKER,KKQRETERAEAERRERV,RKKLQRRELEEKMAKERKEGK
0.00
0.52
0.11
0.01
0.54
0.06
0.07
0.19
0.00
0.10
0.16
not_secreted
transmembrane_domain
cell_membrane
32-58
0.98
0.00
0.16
0.05
0.04
0.11
0.23
0.15
0.20
0.04
0.61
0.09