Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
regions
1-267;469-518;658-786;1424-1498;1577-1580
4
268-468;519-657;787-1423;1499-1576
regions
1-173;294-341
2
174-293;342-412
2hdc_A
PARTIAL_DOMAIN
regions
1-570;1068-1478;1622-1747
2
571-1067;1479-1621
3qcm_B
PARTIAL_DOMAIN
1
1-330
regions
53-329
2
1-52;330-400
regions
1-207
1
208-305
1
1-169
1
1-148
1
1-197
regions
1-71
1
72-238
6zmd_B
PARTIAL_DOMAIN
regions
163-163
1
1-162
full
1-439
0
regions
112-149
1
1-111
1
1-301
regions
1-142
1
143-355
regions
277-382;658-662
2
1-276;383-657
regions
112-275
1
1-111
regions
65-120
1
1-64
1
1-120
full
1-189
0
regions
1-230
1
231-275
1
1-70
regions
471-529
1
1-470
regions
1-96
1
97-150
regions
1-283
1
284-328
regions
1-23;146-151
1
24-145
regions
1-12
1
13-84
1
1-246
regions
1-12
1
13-308
regions
1-47
1
48-213
regions
69-116
2
1-68;117-279
regions
1-51;208-248
1
52-207
regions
1-150;264-317
1
151-263
regions
42-154
2
1-41;155-491
regions
1-1
1
2-282
1
1-249
3zuv_D
PARTIAL_DOMAIN
1
1-155
1
1-347
full
1-340
0
full
1-354
0
regions
1-2;109-117
1
3-108
full
1-418
0
regions
1-12
1
13-157
full
1-418
0
full
1-171
0
1
1-347
full
1-234
0
full
1-649
0
1
1-302
regions
1-166;486-518
1
167-485