Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
1
1-94
1
1-90
1
1-136
regions
309-333
1
1-308
regions
367-379
1
1-366
1
1-380
regions
224-346;518-583;845-963;1101-1145;1469-1860;2040-2305
6
1-223;347-517;584-844;964-1100;1146-1468;1861-2039
8g4l_n
PARTIAL_DOMAIN
regions
1-27;124-126
1
28-123
regions
78-82
1
1-77
1
1-743
6wcq_D
PARTIAL_DOMAIN
regions
340-341
1
1-339
1
1-326
1
1-199
1
1-152
1
1-259
8caf_H
PARTIAL_DOMAIN
regions
320-342
1
1-319
1
1-271
regions
1-3
1
4-165
regions
1-30
1
31-358
regions
1-25
1
26-457
regions
339-350
1
1-338
1
1-470
regions
125-155
1
1-124
regions
621-720
1
1-620
regions
283-302
1
1-282
1
1-119
regions
102-122
1
1-101
regions
102-127
1
1-101
regions
378-391
1
1-377
1
1-559
regions
216-233
1
1-215
regions
38-260;364-433;484-530;876-952
4
1-37;261-363;434-483;531-875
4x0f_B
PARTIAL_DOMAIN
1
1-394
regions
1-3
1
4-372
1
1-584
regions
334-336
1
1-333
1
1-585
1
1-143
regions
1-4
1
5-209
regions
1-31
1
32-374
1
1-673
4ic3_B
PARTIAL_DOMAIN
1
1-395
regions
1-22;344-388
1
23-343
1
1-343
1
1-177
1
1-337
1
1-324
regions
378-378
1
1-377
full
1-233
0
1
1-302