Filters

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Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
regions
231-257
1
1-230
1
1-314
1
1-210
regions
129-214;1339-1385
2
1-128;215-1338
regions
335-410;777-787
2
1-334;411-776
regions
375-376
1
1-374
1
1-359
regions
1-35
1
36-135
1s70_B
PARTIAL_DOMAIN
1
1-338
regions
304-326
1
1-303
1
1-98
1
1-301
1
1-470
1
1-101
full
1-34
0
1
1-239
1
1-204
1
1-155
1
1-74
regions
1-60
1
61-255
6i7l_A
PARTIAL_DOMAIN
regions
409-419
1
1-408
1
1-214
1
1-619
regions
1-5
1
6-519
1
1-320
1
1-163
1ziv_A
PARTIAL_DOMAIN
1
1-579
regions
1-2
1
3-155
regions
345-355
1
1-344
regions
1-39;227-229
1
40-226
1
1-242
8hub_D
STRUCT_HOMOLOG
regions
542-542
1
1-541
regions
327-450;991-1279
2
1-326;451-990
6xdf_B
PARTIAL_DOMAIN
regions
1-186;461-530;956-1154
2
187-460;531-955
7yvc_C
PARTIAL_DOMAIN
regions
1-225
1
226-636
3egb_B
PARTIAL_DOMAIN
regions
1-3
1
4-686
regions
253-333
1
1-252
regions
332-353
1
1-331
regions
177-179
1
1-176
1
1-281
regions
348-377
1
1-347
regions
360-363
1
1-359
full
1-25
0
regions
342-362
1
1-341
regions
1-3
1
4-95
4bzy_C
STRUCT_HOMOLOG
regions
604-617
1
1-603
1
1-197
regions
316-336
1
1-315
1
1-262
1
1-398