Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
regions
376-398
1
1-375
regions
127-383;628-636
2
1-126;384-627
regions
320-348
1
1-319
regions
1-1
1
2-281
1
1-334
regions
342-361
1
1-341
1
1-418
regions
349-356
1
1-348
full
1-85
0
9cai_Ci
STRUCT_HOMOLOG
1
1-181
1x3o_A
PARTIAL_DOMAIN
regions
1-3
1
4-189
4rew_A
STRUCT_HOMOLOG
regions
261-864
1
1-260
regions
112-235
2
1-111;236-461
regions
257-271
1
1-256
regions
337-355
1
1-336
regions
281-395
1
1-280
1
1-343
regions
1-172;208-228
1
173-207
1
1-350
regions
1-4
1
5-94
1
1-169
1
1-131
1
1-65
regions
1-101
1
102-147
1
1-195
regions
1-125;373-458;652-681
2
126-372;459-651
1
1-311
1
1-205
1
1-107
regions
177-211
1
1-176
1
1-257
regions
1-20;105-150
1
21-104
1
1-339
regions
106-124
1
1-105
1
1-181
1
1-135
regions
1-185
1
186-1258
regions
1-13;123-128
1
14-122
1
1-321
1
1-360
regions
1-162;1309-1309
1
163-1308
regions
185-218
1
1-184
regions
443-451
1
1-442
regions
1-60;282-345
1
61-281
5t7c_A
PARTIAL_DOMAIN
regions
1-70
1
71-158
1
1-370
1
1-372
regions
331-378
1
1-330
regions
371-379
1
1-370
regions
330-353
1
1-329