Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
1
1-519
1
1-333
1
1-247
regions
1-174
1
175-1297
regions
62-125
2
1-61;126-338
1
1-300
1
1-137
1
1-376
1
1-85
regions
1-10;123-127
1
11-122
regions
1-202
1
203-1325
regions
215-293
1
1-214
1
1-244
1
1-208
full
1-118
0
regions
50-145
1
1-49
1
1-185
1
1-157
regions
1-263;521-1167
1
264-520
4yr8_H
PARTIAL_DOMAIN
regions
1-73;206-399;440-613
2
74-205;400-439
1oqn_B
PARTIAL_DOMAIN
1
1-450
regions
376-381
1
1-375
regions
51-204
1
1-50
regions
311-379
1
1-310
regions
1-84;492-536
1
85-491
regions
1-2;351-377
1
3-350
regions
1-19;161-189
1
20-160
1
1-297
1
1-112
1
1-197
regions
335-347
1
1-334
regions
346-359
1
1-345
regions
355-356
1
1-354
regions
344-355
1
1-343
1
1-140
regions
353-377
1
1-352
1
1-291
1
1-677
regions
360-503
1
1-359
1w0h_A
PARTIAL_DOMAIN
full
1-105
0
1
1-104
regions
373-379
1
1-372
regions
356-362
1
1-355
regions
330-357
1
1-329
1
1-65
9ygy_G
STRUCT_HOMOLOG
regions
360-503
1
1-359
1w0h_A
PARTIAL_DOMAIN
1
1-710
1
1-207
regions
1-88
1
89-490
1
1-446