Filters

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Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
1
1-161
1
1-167
full
1-173
0
1
1-67
1
1-147
1
1-376
1
1-188
regions
643-720
1
1-642
regions
1-275
1
276-385
regions
1-59
1
60-137
regions
105-107
1
1-104
regions
78-82
1
1-77
full
1-230
0
1
1-246
regions
39-107
2
1-38;108-426
full
1-104
0
1
1-303
2vkp_B
PARTIAL_DOMAIN
1
1-495
8pyx_B
PARTIAL_DOMAIN
1
1-180
regions
39-648;885-937;1200-1340
3
1-38;649-884;938-1199
regions
39-666;903-955;1218-1358
3
1-38;667-902;956-1217
regions
1-8
1
9-581
regions
56-329
1
1-55
regions
281-494
2
1-280;495-572
1
1-121
1
1-217
1
1-106
regions
1-1
1
2-121
1
1-151
1
1-175
regions
136-278
1
1-135
1
1-204
regions
1-64;403-473;770-873;963-994
3
65-402;474-769;874-962
full
1-209
0
regions
1-261
1
262-385
regions
114-227
1
1-113
1
1-197
regions
447-568
1
1-446
regions
1-71;121-179
1
72-120
1
1-158
regions
1-8
1
9-148
full
1-306
0
1
1-374
1
1-116
regions
1-7
1
8-78
regions
472-563
2
1-471;564-731
1
1-78
6t64_C
PARTIAL_DOMAIN
1
1-338
full
1-95
0
regions
282-304
1
1-281