Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
regions
1-200
1
201-316
regions
121-137
1
1-120
1
1-252
full
1-160
0
1
1-191
1
1-350
regions
1-24
1
25-191
1
1-261
regions
1-174
1
175-289
regions
1-193
1
194-347
1
1-252
full
1-280
0
regions
1-188
1
189-342
1
1-128
1
1-324
regions
163-212
1
1-162
regions
1-144
1
145-271
regions
125-196
2
1-124;197-326
4gqt_B
PARTIAL_DOMAIN
regions
356-366
1
1-355
1
1-364
1
1-215
1
1-283
full
1-113
0
regions
163-193
1
1-162
1
1-128
regions
291-297
1
1-290
regions
176-293
1
1-175
regions
338-359
1
1-337
regions
97-126
1
1-96
regions
1-19;66-105
1
20-65
1
1-263
full
1-330
0
regions
720-862
2
1-719;863-906
regions
94-163
1
1-93
1
1-247
7xed_B
PARTIAL_DOMAIN
regions
45-104
2
1-44;105-375
1
1-122
regions
282-295
1
1-281
1
1-199
regions
1-45;98-117
1
46-97
regions
1-262
1
263-346
1
1-153
regions
133-306
1
1-132
full
1-211
0
regions
188-271
1
1-187
4gqt_B
PARTIAL_DOMAIN
full
1-69
0
regions
349-353
1
1-348
regions
1-1
1
2-338
1
1-361
1
1-86