Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
1
1-266
6nbi_A
STRUCT_HOMOLOG
1
1-333
1
1-333
1
1-113
regions
1-63
1
64-644
2evz_A
PARTIAL_DOMAIN
regions
488-491
1
1-487
regions
230-250
1
1-229
5twf_B
STRUCT_HOMOLOG
regions
282-527
1
1-281
1
1-276
regions
200-237
1
1-199
1
1-243
1
1-208
regions
1-366
1
367-410
5zko_C
PARTIAL_DOMAIN
regions
1-273;372-524
1
274-371
7ucd_J
PARTIAL_DOMAIN
regions
1-276;320-438
1
277-319
7ucd_J
PARTIAL_DOMAIN
regions
78-132
2
1-77;133-403
full
1-140
0
full
1-138
0
regions
1-183
1
184-857
regions
1002-1005
1
1-1001
regions
226-310
2
1-225;311-598
1mk2_A
PARTIAL_DOMAIN
1
1-469
1
1-72
1
1-355
9plo_A
STRUCT_HOMOLOG
regions
1-147
1
148-196
1
1-586
regions
1-31
1
32-421
regions
182-206
1
1-181
regions
420-575
2
1-419;576-632
1
1-688
regions
53-302
1
1-52
9ius_W
PARTIAL_DOMAIN
1
1-151
1
1-115
1
1-56
1
1-113
1
1-87
1
1-76
1
1-97
regions
536-689
2
1-535;690-1426
1
1-67
1
1-82
regions
283-366
1
1-282
regions
331-331
1
1-330
1
1-119
regions
319-350
1
1-318
1
1-118
regions
45-113;1143-1209;1304-1380;1503-1513
4
1-44;114-1142;1210-1303;1381-1502
1
1-980
regions
119-267
1
1-118
1
1-379