Filters

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Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
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Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
1
1-154
regions
316-323
1
1-315
1
1-230
regions
259-268
1
1-258
1
1-156
1
1-364
1
1-722
1
1-135
regions
235-280
2
1-234;281-315
regions
314-318
1
1-313
1
1-302
1
1-290
1
1-320
regions
1-29
1
30-295
regions
1-194;458-523
1
195-457
regions
1-135;382-436
1
136-381
1
1-385
regions
1-2;655-710
2
3-654;711-958
regions
1-170
1
171-424
regions
1-171
1
172-425
1
1-270
1
1-182
regions
1-183
1
184-271
regions
1-194
1
195-282
regions
711-719
1
1-710
regions
1-79
1
80-213
1
1-321
1
1-294
1
1-90
1
1-321
regions
859-1969
1
1-858
6qdj_A
PARTIAL_DOMAIN
regions
254-1263;1499-1618;1778-2043
3
1-253;1264-1498;1619-1777
1
1-273
1
1-79
regions
131-336
2
1-130;337-742
regions
104-219
1
1-103
regions
381-414
1
1-380
regions
399-432
1
1-398
1
1-295
1
1-295
1
1-305
1
1-435
regions
124-203
1
1-123
1
1-211
regions
166-203
1
1-165
1
1-110
1
1-320
regions
158-189
1
1-157
1
1-103
1
1-282