Filters

–
Putative Effectors
Secretion:  signal - localization
Homology
Functional
Structure
Biophysics
–
–
–
–
–
–
Composition
Expression
DGE
Change direction refers to the second condition in the label, e.g., positive log2FC for X vs Y → Y up-regulated.
CURRENT STATS:
subset: 18,135 proteins
SCN effectors: 1,221 (putative)
secreted: 2,729    (mean SignalP6: 0.16)
protein length: 422.8 (mean), 7 (min), 5,730 (max)
Core Genomics Effectors Secretion Homology Functional Sequence Structure Biophysics Composition Expression DGE
Disorder (regions) Ordered (regions) PDB (hit type)
1
1-287
1
1-222
regions
124-203
1
1-123
1
1-399
1
1-78
regions
411-448
1
1-410
regions
66-190
1
1-65
regions
124-213
1
1-123
regions
178-234
1
1-177
regions
199-217
1
1-198
5f06_B
PARTIAL_DOMAIN
regions
159-204
1
1-158
1
1-116
1
1-116
full
1-473
0
1
1-187
5vix_A
STRUCT_HOMOLOG
1
1-159
1
1-190
regions
108-127
1
1-107
regions
159-204
1
1-158
full
1-416
0
1
1-187
5vix_A
STRUCT_HOMOLOG
regions
156-277
1
1-155
8yum_A
PARTIAL_DOMAIN
1
1-296
regions
330-331
1
1-329
1
1-330
regions
433-433
1
1-432
1
1-134
regions
171-194
1
1-170
1
1-526
1
1-88
regions
1-34
1
35-411
regions
1-142
1
143-485
1
1-226
1
1-125
1
1-529
1
1-511
1
1-72
regions
418-436
1
1-417
full
1-118
0
1
1-330
1
1-331
1
1-331
1
1-128
1
1-400
1
1-356
1
1-336
1
1-182
1
1-312
1
1-506
1
1-179