Category Property Value Genomics Gene Name Hg_chrom2_TN10gene_4136 Genomics Gene Locus chr2:14157239-14195866 Genomics Nested Gene Genomics (host gene) Genomics Average 1 Genomics TN7 1 Genomics TN8 1 Genomics TN10 1 Genomics TN20 1 Genomics TN22 1 Genomics MM26 1 Genomics OP50 1 Genomics PA3 1 Genomics X12 1 Effectors SCN putative Effectors SCN known (N) Effectors SCN known (P) Effectors BCN known Effectors BCN putative Effectors Effector Islands Effectors Cluster Name 13-Not_Clustered Effectors (score) 0.7500 Secretion Secretion secreted Secretion DL-signals Secretion DL-localization cell_membrane Secretion Localizer chloroplast Secretion L-nucleus Secretion L-mitochondria Secretion (score) Secretion L-chloroplast 32-58 Secretion (score) 0.91 Secretion Signal Peptide 1-21 Secretion (score_v5) 0.9887 Secretion (score_v6) 0.9997 Secretion (TM_v5) 0 Secretion (TM_v6) 0 Secretion nucleus 0.1975 Secretion mitochondrion 0.1364 Secretion plastid 0.0171 Secretion cytoplasm 0.315 Secretion endoplasmic_reticulum 0.1691 Secretion lysosome_vacuole 0.4459 Secretion golgi_apparatus 0.1703 Secretion peroxisome 0.0311 Secretion peroxisome 0.5142 Secretion extracellular 0.3872 Homology Orthogroup OG0003446 Homology (SCN counts) 2 Homology (BCN counts) 1 Homology (BCN genes) Hsc_gene_23979.t1 Homology BCN hits Hsc_gene_23979.t1 Homology C. elegans hits Homology SP best hit Q04833.1 Low-density lipoprotein receptor-related protein [Caenorhabditis elegans] Homology NR best hit KAI1728970.1 low-density lipoprotein receptor domain class A domain-containing protein [Ditylenchus destructor] Homology HGT Donor No Homology HGT Index 0 Functional TF Functional GO terms GO:0005509|GO:0005515 Functional DeepGoPlus GO:0008150_0.963|GO:0009987_0.894|GO:0005575_0.853|GO:0110165_0.828|GO:0065007_0.792|GO:0050789_0.769|GO:0032501_0.699|GO:0051179_0.692|GO:0050794_0.691|GO:0071944_0.685|GO:0006810_0.684|GO:0051234_0.684|GO:0016020_0.673|GO:0032502_0.654|GO:0048856_0.654|GO:0003674_0.637|GO:0005886_0.631|GO:0005622_0.628|GO:0007275_0.620|GO:0048518_0.598|GO:0043226_0.564|GO:0005737_0.559|GO:0005488_0.536|GO:0008152_0.527|GO:0033036_0.522|GO:0071840_0.516|GO:0043229_0.512|GO:0016043_0.510|GO:0043227_0.510 Functional InterPro IPR000033+455-497_502-544_545-585_586-628_606-650_629-671_829-870_878-921_922-964_1548-1590_1568-1610_1591-1633_1611-1654_1612-1652_1634-1678_1655-1698_1656-1695_1679-1721_1699-1743_1723-1766_1925-1968_1971-2021_2022-2064_2065-2105_2243-2289_2265-2309_2290-2333_2310-2353_2311-2351_2334-2376_2383-2425_2577-2623_2624-2672_2642-2689_2642-2692_2673-2715_2693-2718+|IPR000742+333-369_373-427_711-751_1045-1088_1190-1228_1314-1353_1444-1480_1484-1520_1795-1833_2133-2170_2456-2496_2791-2840_3183-3220_3223-3259+|IPR001881+330-369_370-400_1441-1480_1481-1520_1796-1833+|IPR002172+82-118_82-119_83-117_121-162_121-163_122-161_167-208_170-209_176-205_213-250_213-251_213-252_214-246_254-289_254-290_254-291_255-289_293-329_293-330_293-331_294-329_1098-1139_1098-1142_1104-1132_1104-1134_1111-1132_1146-1180_1146-1185_1146-1186_1147-1180_1158-1179_1190-1228_1190-1229_1191-1223_1191-1225_1201-1222_1231-1268_1231-1269_1231-1270_1232-1264_1272-1308_1272-1309_1272-1310_1273-1308_1284-1305_1314-1352_1314-1353_1314-1354_1315-1347_1326-1347_1357-1394_1358-1395_1358-1396_1359-1392_1369-1390_1402-1441_1402-1442_1403-1436_2848-2883_2848-2888_2848-2889_2851-2883_2891-2927_2891-2928_2892-2926_2956-2996_2956-2997_2957-2991_2957-2995_3001-3040_3001-3041_3043-3081_3043-3082_3043-3083_3044-3070_3089-3129_3089-3130_3096-3122_3096-3126_3131-3173_3132-3178_3132-3179_3133-3172_3183-3219_3183-3220_3183-3221_3184-3219_3223-3258_3223-3259_3223-3260_3224-3258_3282-3320_3283-3314+|IPR009030+1796-2489+|IPR011042+423-748_749-1090_1527-1835_1836-2169_2170-2492_2493-2834+|IPR018097+370-393+|IPR023415+95-117_139-161_267-289_307-329_1286-1308_1371-1394_1417-1440_2863-2887_3196-3219_3236-3258+|IPR036055+78-118_81-125_120-162_126-162_165-212_173-205_211-248_213-257_249-289_258-291_292-329_292-331_1096-1139_1100-1134_1142-1181_1146-1184_1188-1229_1189-1227_1227-1268_1230-1269_1265-1308_1270-1312_1313-1354_1314-1350_1355-1393_1356-1397_1398-1441_1401-1436_2846-2882_2849-2888_2886-2926_2889-2932_2950-2995_2951-2986_3001-3039_3001-3040_3037-3077_3041-3083_3087-3130_3092-3124_3129-3177_3131-3181_3182-3218_3182-3221_3216-3258_3222-3266_3280-3314_3281-3317+|IPR051221+175-294+ Functional SMART SM00135+455-497_502-544_545-585_586-628_629-671_829-870_878-921_922-964_1548-1590_1591-1633_1634-1678_1679-1721_1723-1766_1925-1968_1971-2021_2022-2064_2065-2105_2243-2289_2290-2333_2334-2376_2383-2425_2577-2623_2624-2672_2673-2715+|SM00179+330-369_370-400_1441-1480_1481-1520_1796-1833+|SM00181+333-369_373-427_711-751_1045-1088_1190-1228_1314-1353_1444-1480_1484-1520_1795-1833_2133-2170_2456-2496_2791-2840_3183-3220_3223-3259+|SM00192+82-119_121-163_170-209_213-252_254-291_293-331_1098-1139_1146-1186_1190-1229_1231-1270_1272-1310_1314-1354_1358-1396_1402-1442_2848-2889_2891-2928_2956-2997_3001-3041_3043-3083_3089-3130_3132-3179_3183-3221_3223-3260_3282-3320+ Functional Pfam PF00057+83-117_213-250_254-289_293-329_1104-1132_1146-1180_1191-1225_1231-1268_1272-1308_1314-1352_1357-1394_2848-2883_2892-2926_2957-2995_3043-3081_3096-3126_3131-3173_3183-3219_3223-3258+Low-density_lipoprotein_receptor_domain_class_A|PF00058+1612-1652_1656-1695_2311-2351_2642-2689+Low-density_lipoprotein_receptor_repeat_class_B Functional FunFam G3DSA:2.10.25.10:FF:000009+1443-1524+Low-density_lipoprotein_receptor_isoform_1|G3DSA:2.120.10.30:FF:000241+428-740_1520-1821_2170-2487+Low-density_lipoprotein_receptor-related_protein_6|G3DSA:4.10.400.10:FF:000001+1188-1229+Low-density_lipoprotein_receptor-related_protein_1|G3DSA:4.10.400.10:FF:000002+1313-1355_3182-3222+Low-density_lipoprotein_receptor-related_protein_1|G3DSA:4.10.400.10:FF:000005+1230-1270+low-density_lipoprotein_receptor-related_protein_1B|G3DSA:4.10.400.10:FF:000011+1357-1396+Low-density_lipoprotein_receptor-related_protein_1|G3DSA:4.10.400.10:FF:000034+81-119+Low-density_lipoprotein_receptor-related_protein_2|G3DSA:4.10.400.10:FF:000045+1271-1312+Low-density_lipoprotein_receptor-related_protein_2|G3DSA:4.10.400.10:FF:000147+291-331+Low-density_lipoprotein_receptor-related_protein_2|G3DSA:4.10.400.10:FF:000190+212-252+Low-density_lipoprotein_receptor-related_protein|G3DSA:4.10.400.10:FF:000209+3129-3179+Low-density_lipoprotein_receptor-related_protein|G3DSA:4.10.400.10:FF:000287+120-166+Low-density_lipoprotein_receptor-related_protein Functional Panther PTHR22722+175-294+ Sequence Protein Sequence Structure Disorder Structure (regions) Structure Ordered 1 Structure (regions) 1-3320 Structure PDB 8yw2_A Structure (hit type) PARTIAL_DOMAIN Biophysics Inclusion Body 0.5 Biophysics Mol weight 369546.99 Biophysics pI 4.9533 Biophysics Net Charge -87.5 Biophysics Charged 26.687 Biophysics Aromatic 10.994 Biophysics Polar 48.012 Biophysics Non-polar 51.988 Biophysics Basic 12.711 Biophysics Acidic 13.976 Biophysics Small 56.928 Composition Ala 0.767 Composition Asn 1.205 Composition Asp 1.643 Composition Cys 2.285 Composition Glu 0.823 Composition Gln 1.12 Composition Gly 0.857 Composition His 1.37 Composition Ile 1.218 Composition Leu 0.757 Composition Lys 0.671 Composition Met 1.01 Composition Phe 1.063 Composition Pro 1.008 Composition Arg 1.131 Composition Ser 0.96 Composition Thr 0.83 Composition Val 0.799 Composition Trp 1.228 Composition Tyr 0.833 Composition Xaa 0.0 Expression Bin13 turquoise Expression Bin38 greenyellow Expression Average 3419.2294 Expression Egg 2734.7022 Expression ppJ2 4817.989 Expression pJ2 1761.2198 Expression J3 2364.6491 Expression J4 4037.2234 Expression Female 2245.0228 Expression Male 3843.6944 Expression Gland (J2) 506.2422 Expression Gland (J3) 6402.7594 Expression Gland (J2+J3) 3875.6806 DGE Egg vs ppJ2 0.5895 DGE Egg vs pJ2 -0.772 DGE ppJ2 vs pJ2 -1.3446 DGE pJ2 vs J3 0.3929 DGE J3 vs J4 0.7878 DGE J4 vs F -0.8387 DGE J4 vs M DGE F vs M -0.6334 DGE G(J3 vs J2) -3.7786 DGE G(J2) vs pJ2 DGE G(J3) vs J3 DGE G(J2) lines DGE G(J3) lines